RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 TULP3O75386 442 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 PAPSS2O95340 614 aaPredicted RBP13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 ATP5BP06576 529 aaKnown RBP13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 SP100P23497 879 aaPredicted RBP13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 GDI1P31150 447 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 NNMTP40261 264 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 VASPP50552 380 aaPredicted RBP13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 PPP2R2AP63151 447 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 RUNX3Q13761 415 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 GRM2Q14416 872 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 PUM1Q14671 1186 aaKnown RBP eCLIP13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 ST3GAL2Q16842 350 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 GEN1Q17RS7 908 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 PREPLQ4J6C6 727 aaPredicted RBP13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 TSTD2Q5T7W7 516 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 ARMC12Q5T9G4 340 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 PDPK2PQ6A1A2 396 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 KIAA0930Q6ICG6 404 aaPredicted RBP13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 KCNMB4Q86W47 210 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 ETFBKMTQ8IXQ9 262 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 KIAA2013Q8IYS2 634 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 CYP4X1Q8N118 509 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 RYBPQ8N488 228 aaPredicted RBP13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 LPCAT1Q8NF37 534 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 MYO19Q96H55 970 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 TUBGCP5Q96RT8 1024 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 PLA2G2FQ9BZM2 168 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 ATP13A3Q9H7F0 1226 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 TREX1Q9NSU2 369 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 C20orf96Q9NUD7 363 aaPredicted RBP13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 NSMCE4AQ9NXX6 385 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 ZFATQ9P243 1243 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 EVLQ9UI08 416 aaPredicted RBP13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 PCDHGC4Q9Y5F7 938 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 ACTL7BQ9Y614 415 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 CCDC78A2IDD5 438 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 C2CD4DB7Z1M9 353 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 KRT38O76015 456 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 SRPRAP08240 638 aaKnown RBP13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 CISD3P0C7P0 127 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 ERVK-10P10266 1014 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 CNTFP26441 200 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 SERPINA4P29622 427 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 RECQLP46063 649 aaPredicted RBP13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 GRIA4P48058 902 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 RPL26P61254 145 aaKnown RBP13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 RAD51Q06609 339 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 BCL2L1Q07817 233 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 MSLNQ13421 630 aaPredicted RBP13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 GRM3Q14832 879 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 EIF4HQ15056 248 aaKnown RBP13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 GAB4Q2WGN9 574 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 ACCSLQ4AC99 568 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 TRABD2AQ86V40 505 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 EXOC3L1Q86VI1 746 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 C12orf40Q86WS4 652 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 SRRM1Q8IYB3 904 aaKnown RBP13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 UNC5BQ8IZJ1 945 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 PAF1Q8N7H5 531 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 GABPB2Q8TAK5 448 aaPredicted RBP13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 BLOC1S5Q8TDH9 187 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 CSGALNACT1Q8TDX6 532 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 PDCD6IPQ8WUM4 868 aaKnown RBP13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 PEX13Q92968 403 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 MTBPQ96DY7 904 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 NSMCE3Q96MG7 304 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 SELENOSQ9BQE4 189 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 CIPCQ9C0C6 399 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 TNKS2Q9H2K2 1166 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 BRD9Q9H8M2 597 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 CNOT10Q9H9A5 744 aaKnown RBP13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 HACD3Q9P035 362 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 DEC1Q9P2X7 70 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 RIMKLBQ9ULI2 386 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 RPL26L1Q9UNX3 145 aaKnown RBP13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 ATRXP46100 2492 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 PKD1L2Q7Z442 2459 aa13.92□□□□□ -0.18
PDLIM5-203ENST00000359265 MYO10Q9HD67 2058 aa13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 COL4A2P08572 1712 aa13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 ZNF821O75541 412 aaPredicted RBP13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 PIAS1O75925 651 aa13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 PGLSO95336 258 aa13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 CRTAMO95727 393 aa13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 PRLP01236 227 aa13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 SNRPAP09012 282 aaKnown RBP13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 GP5P40197 560 aa13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 EIF2DP41214 584 aaKnown RBP13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 EPHB1P54762 984 aa13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 KDSRQ06136 332 aa13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 DLG2Q15700 870 aa13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 ITPRIPL2Q3MIP1 535 aa13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 CARD16Q5EG05 197 aa13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 DGKKQ5KSL6 1271 aa13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 EMC10Q5UCC4 262 aa13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 TMEM215Q68D42 235 aa13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 ESRP1Q6NXG1 681 aaKnown RBP13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 PACS1Q6VY07 963 aa13.91□□□□□ -0.18
PDLIM5-203ENST00000359265 PLPP6Q8IY26 295 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms