RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 KCNU1A8MYU2 1149 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 VDRP11473 427 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 TCEA1P23193 301 aaKnown RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 CDK18Q07002 472 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 DOK7Q18PE1 504 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 WSCD2Q2TBF2 565 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 UBA3Q8TBC4 463 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 HDAC10Q969S8 669 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 ROPN1LQ96C74 230 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 FAM193BQ96PV7 902 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 ANKEF1Q9NU02 776 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 SPASTQ9UBP0 616 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 NUP50Q9UKX7 468 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 ABCA6Q8N139 1617 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 ZBTB24O43167 697 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 PLIN3O60664 434 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 RFPL2O75678 378 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 ANGPTL1O95841 491 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 GPIP06744 558 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 MYBPC1Q00872 1141 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 ALDH6A1Q02252 535 aaKnown RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 CYP1B1Q16678 543 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 TMPRSS11AQ6ZMR5 421 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 C16orf86Q6ZW13 317 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 PABPC5Q96DU9 382 aaKnown RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 COPS4Q9BT78 406 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 SENP6Q9GZR1 1112 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 AS3MTQ9HBK9 375 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 PCDHGA4Q9Y5G9 962 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 CYB561D2O14569 222 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 CDH4P55283 916 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 USF2Q15853 346 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 ZNF280DQ6N043 979 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 PGBD2Q6P3X8 592 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 PHF13Q86YI8 300 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 OR52K1Q8NGK4 314 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 PAK6Q9NQU5 681 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 COMMD9Q9P000 198 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 EBF1Q9UH73 591 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 LOC102724428A0A0B4J2F2 783 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 BCLAF3A2AJT9 711 aaKnown RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 PLD2O14939 933 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 KHDRBS3O75525 346 aaKnown RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 SLC22A3O75751 556 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 MYCP01106 439 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 MTHFRP42898 656 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 SIK1P57059 783 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 JAM2P57087 298 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 ARHGEF6Q15052 776 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 FGD3Q5JSP0 725 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 RBM48Q5RL73 367 aaKnown RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 GOLM1Q8NBJ4 401 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 ZFP28Q8NHY6 868 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 VPS35Q96QK1 796 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 ZNF347Q96SE7 839 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 ZSCAN5AQ9BUG6 496 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 GSTK1Q9Y2Q3 226 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 PCDHB12Q9Y5F1 795 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 ZNF701M0R085 212 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 HGFP14210 728 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 RCVRNP35243 200 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 YWHAZP63104 245 aaKnown RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 EML3Q32P44 896 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 TBC1D25Q3MII6 688 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 IL23RQ5VWK5 629 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 STYK1Q6J9G0 422 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 DPY19L3Q6ZPD9 716 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 IFNLR1Q8IU57 520 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 FOPNLQ96NB1 174 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 FUOMA2VDF0 154 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 DYRK3O43781 588 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 ASS1P00966 412 aaKnown RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 NKX2-5P52952 324 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 EEFSECP57772 596 aaKnown RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 GRAPQ13588 217 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 OVOS1Q6IE37 1185 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 NPNTQ6UXI9 565 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 EEPD1Q7L9B9 569 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 GRAPLQ8TC17 118 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 BTN2A2Q8WVV5 523 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 NEK6Q9HC98 313 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 DNAJC11Q9NVH1 559 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 ARHGAP28Q9P2N2 729 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 ARPC2O15144 300 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 GLP2RO95838 553 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 TCF4P15884 667 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 CRADDP78560 199 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 TIGD7Q6NT04 549 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-203ENST00000358544 FAM180AQ6UWF9 173 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 LDHDQ86WU2 507 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 OR2T12Q8NG77 320 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 CORO1BQ9BR76 489 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 DCSTAMPQ9H295 470 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 ACTR8Q9H981 624 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 INVSQ9Y283 1065 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 C9P02748 559 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 TFEBP19484 476 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 MATN1P21941 496 aa6.09□□□□□ -1.43
VPS13B-203ENST00000358544 PSMB4P28070 264 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms