RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 SLC12A1Q13621 1099 aa16.1■□□□□ 0.17
PTPN5-201ENST00000358540 RABGAP1LQ5R372 815 aa16.1■□□□□ 0.17
PTPN5-201ENST00000358540 NET1Q7Z628 596 aaPredicted RBP16.1■□□□□ 0.17
PTPN5-201ENST00000358540 CCNYL1Q8N7R7 359 aa16.1■□□□□ 0.17
PTPN5-201ENST00000358540 ARRDC2Q8TBH0 407 aa16.1■□□□□ 0.17
PTPN5-201ENST00000358540 BLOC1S5Q8TDH9 187 aa16.1■□□□□ 0.17
PTPN5-201ENST00000358540 WDR55Q9H6Y2 383 aaPredicted RBP16.1■□□□□ 0.17
PTPN5-201ENST00000358540 OLA1Q9NTK5 396 aaKnown RBP16.1■□□□□ 0.17
PTPN5-201ENST00000358540 LOC100653049A0A140TA62 436 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 TBC1D4O60343 1298 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 KRT34O76011 436 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 DNAJB2P25686 324 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 ACTR3P61158 418 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 CSHL1Q14406 222 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 TRMT5Q32P41 509 aaKnown RBP16.09■□□□□ 0.17
PTPN5-201ENST00000358540 SFT2D3Q587I9 215 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 LRRC8EQ6NSJ5 796 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 DENND1CQ8IV53 801 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 CNTN4Q8IWV2 1026 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 OR13J1Q8NGT2 312 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 SH3RF2Q8TEC5 729 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 OLFM1Q99784 485 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 OXSMQ9NWU1 459 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 NSMCE4AQ9NXX6 385 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 TBC1D30Q9Y2I9 924 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 SERINC3Q13530 473 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 UGP2Q16851 508 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 TSTD2Q5T7W7 516 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 KIAA0930Q6ICG6 404 aaPredicted RBP16.09■□□□□ 0.17
PTPN5-201ENST00000358540 ANKS3Q6ZW76 656 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 RPS27LQ71UM5 84 aaKnown RBP16.09■□□□□ 0.17
PTPN5-201ENST00000358540 PHTF2Q8N3S3 785 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 C2CD4AQ8NCU7 369 aaPredicted RBP16.09■□□□□ 0.17
PTPN5-201ENST00000358540 HDAC10Q969S8 669 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 SMIM14Q96QK8 99 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 VN1R3Q9BXE9 311 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 CYP4F12Q9HCS2 524 aa16.09■□□□□ 0.17
PTPN5-201ENST00000358540 MARCH4Q9P2E8 410 aaPredicted RBP16.09■□□□□ 0.17
PTPN5-201ENST00000358540 ZFP37Q9Y6Q3 630 aaPredicted RBP16.09■□□□□ 0.17
PTPN5-201ENST00000358540 HEATR9A2RTY3 570 aa16.08■□□□□ 0.17
PTPN5-201ENST00000358540 F5H5T6 163 aa16.08■□□□□ 0.17
PTPN5-201ENST00000358540 TSPAN3O60637 253 aa16.08■□□□□ 0.17
PTPN5-201ENST00000358540 PIGNO95427 931 aa16.08■□□□□ 0.17
PTPN5-201ENST00000358540 IGLV3-27P01718 113 aa16.08■□□□□ 0.17
PTPN5-201ENST00000358540 COL6A1P12109 1028 aa16.08■□□□□ 0.17
PTPN5-201ENST00000358540 SGSHP51688 502 aa16.08■□□□□ 0.17
PTPN5-201ENST00000358540 SLC12A2P55011 1212 aa16.08■□□□□ 0.17
PTPN5-201ENST00000358540 SLC25A3Q00325 362 aa16.08■□□□□ 0.17
PTPN5-201ENST00000358540 ZNF235Q14590 738 aa16.08■□□□□ 0.17
PTPN5-201ENST00000358540 MMEL1Q495T6 779 aa16.08■□□□□ 0.17
PTPN5-201ENST00000358540 IL31Q6EBC2 164 aa16.08■□□□□ 0.17
PTPN5-201ENST00000358540 ZYG11AQ6WRX3 759 aa16.08■□□□□ 0.17
PTPN5-201ENST00000358540 LRRC49Q8IUZ0 686 aa16.08■□□□□ 0.17
PTPN5-201ENST00000358540 OR52B2Q96RD2 323 aa16.08■□□□□ 0.17
PTPN5-201ENST00000358540 CDH19Q9H159 772 aa16.08■□□□□ 0.17
PTPN5-201ENST00000358540 HIPK3Q9H422 1215 aa16.08■□□□□ 0.17
PTPN5-201ENST00000358540 ARL5AQ9Y689 179 aa16.08■□□□□ 0.17
PTPN5-201ENST00000358540 PLXNA3P51805 1871 aa16.08■□□□□ 0.17
PTPN5-201ENST00000358540 DOCK4Q8N1I0 1966 aa16.08■□□□□ 0.16
PTPN5-201ENST00000358540 DCXO43602 365 aa16.08■□□□□ 0.16
PTPN5-201ENST00000358540 DLX3O60479 287 aa16.08■□□□□ 0.16
PTPN5-201ENST00000358540 TM7SF2O76062 418 aa16.08■□□□□ 0.16
PTPN5-201ENST00000358540 ALDH7A1P49419 539 aaKnown RBP16.08■□□□□ 0.16
PTPN5-201ENST00000358540 ASPHQ12797 758 aa16.08■□□□□ 0.16
PTPN5-201ENST00000358540 ARL13AQ5H913 290 aaPredicted RBP16.08■□□□□ 0.16
PTPN5-201ENST00000358540 KIAA1841Q6NSI8 718 aa16.08■□□□□ 0.16
PTPN5-201ENST00000358540 HEXDCQ8WVB3 486 aa16.08■□□□□ 0.16
PTPN5-201ENST00000358540 ZNF232Q9UNY5 417 aa16.08■□□□□ 0.16
PTPN5-201ENST00000358540 FIS1Q9Y3D6 152 aa16.08■□□□□ 0.16
PTPN5-201ENST00000358540 GMEB1Q9Y692 573 aa16.08■□□□□ 0.16
PTPN5-201ENST00000358540 DRGXA6NNA5 263 aa16.08■□□□□ 0.16
PTPN5-201ENST00000358540 SEC24AO95486 1093 aa16.08■□□□□ 0.16
PTPN5-201ENST00000358540 VCLP18206 1134 aa16.08■□□□□ 0.16
PTPN5-201ENST00000358540 CSRP3P50461 194 aa16.08■□□□□ 0.16
PTPN5-201ENST00000358540 PLK1P53350 603 aa16.08■□□□□ 0.16
PTPN5-201ENST00000358540 HPCAP84074 193 aa16.08■□□□□ 0.16
PTPN5-201ENST00000358540 RBM44Q6ZP01 1051 aaKnown RBP16.08■□□□□ 0.16
PTPN5-201ENST00000358540 WBP2Q969T9 261 aa16.08■□□□□ 0.16
PTPN5-201ENST00000358540 DGCR14Q96DF8 476 aaKnown RBP16.08■□□□□ 0.16
PTPN5-201ENST00000358540 SMPD4Q9NXE4 827 aa16.08■□□□□ 0.16
PTPN5-201ENST00000358540 CRYL1Q9Y2S2 319 aa16.08■□□□□ 0.16
PTPN5-201ENST00000358540 A0A0J9YVX5 310 aa16.07■□□□□ 0.16
PTPN5-201ENST00000358540 TMEM233B4DJY2 109 aa16.07■□□□□ 0.16
PTPN5-201ENST00000358540 H7C4K7 107 aa16.07■□□□□ 0.16
PTPN5-201ENST00000358540 PRSS56P0CW18 603 aa16.07■□□□□ 0.16
PTPN5-201ENST00000358540 CCDC166P0CW27 439 aa16.07■□□□□ 0.16
PTPN5-201ENST00000358540 AQP4P55087 323 aa16.07■□□□□ 0.16
PTPN5-201ENST00000358540 SPOUT1Q5T280 376 aaKnown RBP16.07■□□□□ 0.16
PTPN5-201ENST00000358540 C16orf59Q7L2K0 433 aa16.07■□□□□ 0.16
PTPN5-201ENST00000358540 PDSS2Q86YH6 399 aa16.07■□□□□ 0.16
PTPN5-201ENST00000358540 EFCAB3Q8N7B9 438 aa16.07■□□□□ 0.16
PTPN5-201ENST00000358540 HIPK4Q8NE63 616 aa16.07■□□□□ 0.16
PTPN5-201ENST00000358540 SPATA17Q96L03 361 aa16.07■□□□□ 0.16
PTPN5-201ENST00000358540 TBATAQ96M53 351 aa16.07■□□□□ 0.16
PTPN5-201ENST00000358540 SMIM31A0A1B0GVY4 71 aa16.07■□□□□ 0.16
PTPN5-201ENST00000358540 FKTNO75072 461 aa16.07■□□□□ 0.16
PTPN5-201ENST00000358540 JUNP05412 331 aaKnown RBP16.07■□□□□ 0.16
PTPN5-201ENST00000358540 ATXN1LP0C7T5 689 aaKnown RBP16.07■□□□□ 0.16
PTPN5-201ENST00000358540 EPHA3P29320 983 aa16.07■□□□□ 0.16
PTPN5-201ENST00000358540 ATP5C1P36542 298 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms