RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 SLC18A1P54219 525 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 HHIPL2Q6UWX4 724 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 FNDC8Q8TC99 324 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 GMCL1Q96IK5 515 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 PNPOQ9NVS9 261 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 ST3GAL5Q9UNP4 418 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 ASTN1O14525 1302 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.8□□□□□ -1
COL6A6-201ENST00000358511 OR14I1A6ND48 311 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 HBP1O60381 514 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 KPNA6O60684 536 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 TRUB2O95900 331 aaKnown RBP8.8□□□□□ -1
COL6A6-201ENST00000358511 OVOS1Q6IE37 1185 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 APOBEC3FQ8IUX4 373 aaKnown RBP8.8□□□□□ -1
COL6A6-201ENST00000358511 GALNT6Q8NCL4 622 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 CAPN10Q9HC96 672 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 ANGPT4Q9Y264 503 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 SLC9A8Q9Y2E8 581 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 METTL18O95568 372 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 C9P02748 559 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 SLC11A2P49281 568 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 RHAGQ02094 409 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 UNC5AQ6ZN44 842 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 GPRIN3Q6ZVF9 776 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 SCUBE3Q8IX30 993 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 PNMA5Q96PV4 448 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 TMEM9Q9P0T7 183 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 ADGRE2Q9UHX3 823 aa8.8□□□□□ -1
COL6A6-201ENST00000358511 ATRNO75882 1429 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 PRAMEF33A0A0G2JMD5 474 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 ZNF879B4DU55 563 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 AGRPO00253 132 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 CHST10O43529 356 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 PRAMEF10O60809 474 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 USP12O75317 370 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 HNRNPLP14866 589 aaKnown RBP eCLIP8.79□□□□□ -1
COL6A6-201ENST00000358511 DARSP14868 501 aaKnown RBP8.79□□□□□ -1
COL6A6-201ENST00000358511 TGM3Q08188 693 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 SUZ12Q15022 739 aaKnown RBP8.79□□□□□ -1
COL6A6-201ENST00000358511 HGSNATQ68CP4 663 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 TMPRSS11AQ6ZMR5 421 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 FBXO33Q7Z6M2 555 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 LZTR1Q8N653 840 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 C11orf24Q96F05 449 aaPredicted RBP8.79□□□□□ -1
COL6A6-201ENST00000358511 ANKHQ9HCJ1 492 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 TLL2Q9Y6L7 1015 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 CDK5RAP2Q96SN8 1893 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 CCDC189A1A4V9 331 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 CABYRO75952 493 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 PGK1P00558 417 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 MAGEA2P43356 314 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 ARF5P84085 180 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 STRIP1Q5VSL9 837 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 ZNF517Q6ZMY9 492 aaPredicted RBP8.79□□□□□ -1
COL6A6-201ENST00000358511 GK5Q6ZS86 529 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 GLT6D1Q7Z4J2 308 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 GMCL1P1Q8NEA9 526 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 OR52K1Q8NGK4 314 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 SLC9A7Q96T83 725 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 PTGFRNQ9P2B2 879 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 SNX6Q9UNH7 406 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 PCDHGA4Q9Y5G9 962 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 GPR75-ASB3A0A0A6YYF3 556 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 PGRP06401 933 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 PSKH1P11801 424 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 MARSP56192 900 aaKnown RBP8.79□□□□□ -1
COL6A6-201ENST00000358511 OR2T12Q8NG77 320 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 ITCHQ96J02 903 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 ZC3H10Q96K80 434 aaKnown RBP8.79□□□□□ -1
COL6A6-201ENST00000358511 RPRD1AQ96P16 312 aaPredicted RBP8.79□□□□□ -1
COL6A6-201ENST00000358511 CDK5RAP1Q96SZ6 601 aaKnown RBP8.79□□□□□ -1
COL6A6-201ENST00000358511 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.79□□□□□ -1
COL6A6-201ENST00000358511 TCRBV5S4A2TA0A5A2 114 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 RPLP0P05388 317 aaKnown RBP8.79□□□□□ -1
COL6A6-201ENST00000358511 YWHAZP63104 245 aaKnown RBP8.79□□□□□ -1
COL6A6-201ENST00000358511 SLC6A3Q01959 620 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 ZNF177Q13360 481 aaPredicted RBP8.79□□□□□ -1
COL6A6-201ENST00000358511 TMEM53Q6P2H8 277 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 SPPL2CQ8IUH8 684 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 TMEM126BQ8IUX1 230 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 C4orf19Q8IY42 314 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 EMILIN2Q9BXX0 1053 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 EXD2Q9NVH0 621 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 GAKO14976 1311 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 STAG3L1P0CL83 205 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 CTSKP43235 329 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 GNA12Q03113 381 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 ATP13A5Q4VNC0 1218 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 RBM48Q5RL73 367 aaKnown RBP8.79□□□□□ -1
COL6A6-201ENST00000358511 TXNDC11Q6PKC3 985 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 DDX53Q86TM3 631 aaKnown RBP8.79□□□□□ -1
COL6A6-201ENST00000358511 SYT12Q8IV01 421 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 MND1Q9BWT6 205 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 TRPM5Q9NZQ8 1165 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 TRAF6Q9Y4K3 522 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 KNL1Q8NG31 2342 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 AZIN1O14977 448 aa8.79□□□□□ -1
COL6A6-201ENST00000358511 ACO1P21399 889 aaKnown RBP8.79□□□□□ -1
COL6A6-201ENST00000358511 RPL3P39023 403 aaKnown RBP8.79□□□□□ -1
COL6A6-201ENST00000358511 POLD2P49005 469 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms