RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 NPHS1O60500 1241 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 B4GALT3O60512 393 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 IGLV3-25P01717 112 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 UGT1A6P19224 532 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 CHRM3P20309 590 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 PRKAA2P54646 552 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 TSPY1Q01534 308 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 MORN1Q5T089 497 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 TAF2Q6P1X5 1199 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 KLC3Q6P597 504 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 CD300LGQ6UXG3 332 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 RSPH1Q8WYR4 309 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 KATNAL1Q9BW62 490 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 SP110Q9HB58 689 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 PRG3Q9Y2Y8 225 aaPredicted RBP20.53■□□□□ 0.88
COL13A1-202ENST00000357811 AP4S1Q9Y587 144 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 A0A087X1B8 175 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 PRSS51A0A1B0GVH4 220 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 TIPRLO75663 272 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 SLC7A2P52569 658 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 FOXA1P55317 472 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 GALNT3Q14435 633 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 PELI3Q8N2H9 469 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 ARHGAP18Q8N392 663 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 MARVELD2Q8N4S9 558 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 PTERQ96BW5 349 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 SLC29A1Q99808 456 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 Q9H521 79 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 EPS15L1Q9UBC2 864 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 EGFL7Q9UHF1 273 aa20.53■□□□□ 0.88
COL13A1-202ENST00000357811 USP46P62068 366 aa20.52■□□□□ 0.88
COL13A1-202ENST00000357811 TRIM25Q14258 630 aaKnown RBP20.52■□□□□ 0.88
COL13A1-202ENST00000357811 MGAT5BQ3V5L5 792 aa20.52■□□□□ 0.88
COL13A1-202ENST00000357811 MARC1Q5VT66 337 aa20.52■□□□□ 0.88
COL13A1-202ENST00000357811 TMEM102Q8N9M5 508 aaPredicted RBP20.52■□□□□ 0.88
COL13A1-202ENST00000357811 ZFAND2BQ8WV99 257 aa20.52■□□□□ 0.88
COL13A1-202ENST00000357811 IRGQQ8WZA9 623 aa20.52■□□□□ 0.88
COL13A1-202ENST00000357811 MAELQ96JY0 434 aaKnown RBP20.52■□□□□ 0.88
COL13A1-202ENST00000357811 SMIM14Q96QK8 99 aa20.52■□□□□ 0.88
COL13A1-202ENST00000357811 HAPLN3Q96S86 360 aa20.52■□□□□ 0.88
COL13A1-202ENST00000357811 BTRCQ9Y297 605 aa20.52■□□□□ 0.88
COL13A1-202ENST00000357811 HEATR9A2RTY3 570 aa20.52■□□□□ 0.88
COL13A1-202ENST00000357811 FAM149AA5PLN7 773 aa20.52■□□□□ 0.88
COL13A1-202ENST00000357811 NR5A2O00482 541 aa20.52■□□□□ 0.88
COL13A1-202ENST00000357811 CAPRIN1Q14444 709 aaKnown RBP20.52■□□□□ 0.88
COL13A1-202ENST00000357811 RAP1GAP2Q684P5 730 aa20.52■□□□□ 0.88
COL13A1-202ENST00000357811 ZFP1Q6P2D0 407 aa20.52■□□□□ 0.88
COL13A1-202ENST00000357811 KDELC1Q6UW63 502 aa20.52■□□□□ 0.88
COL13A1-202ENST00000357811 CYHR1Q6ZMK1 362 aa20.52■□□□□ 0.88
COL13A1-202ENST00000357811 CILP2Q8IUL8 1156 aa20.52■□□□□ 0.88
COL13A1-202ENST00000357811 ZNF512Q96ME7 567 aaPredicted RBP20.52■□□□□ 0.88
COL13A1-202ENST00000357811 PHF12Q96QT6 1004 aa20.52■□□□□ 0.88
COL13A1-202ENST00000357811 TSR3Q9UJK0 312 aaKnown RBP20.52■□□□□ 0.88
COL13A1-202ENST00000357811 MKI67P46013 3256 aaKnown RBP20.52■□□□□ 0.88
COL13A1-202ENST00000357811 ECT2LQ008S8 904 aa20.52■□□□□ 0.87
COL13A1-202ENST00000357811 TAF1CQ15572 869 aaPredicted RBP20.52■□□□□ 0.87
COL13A1-202ENST00000357811 PFKFB4Q16877 469 aa20.52■□□□□ 0.87
COL13A1-202ENST00000357811 ARHGAP22Q7Z5H3 698 aa20.52■□□□□ 0.87
COL13A1-202ENST00000357811 HERC6Q8IVU3 1022 aa20.52■□□□□ 0.87
COL13A1-202ENST00000357811 DDIASQ8IXT1 998 aa20.52■□□□□ 0.87
COL13A1-202ENST00000357811 TSPAN18Q96SJ8 248 aa20.52■□□□□ 0.87
COL13A1-202ENST00000357811 RGS18Q9NS28 235 aa20.52■□□□□ 0.87
COL13A1-202ENST00000357811 AURKCQ9UQB9 309 aa20.52■□□□□ 0.87
COL13A1-202ENST00000357811 PDE4DIPQ5VU43 2346 aa20.51■□□□□ 0.87
COL13A1-202ENST00000357811 FGF10O15520 208 aaPredicted RBP20.51■□□□□ 0.87
COL13A1-202ENST00000357811 DENRO43583 198 aaKnown RBP20.51■□□□□ 0.87
COL13A1-202ENST00000357811 PFKPQ01813 784 aa20.51■□□□□ 0.87
COL13A1-202ENST00000357811 YWHAHQ04917 246 aaPredicted RBP20.51■□□□□ 0.87
COL13A1-202ENST00000357811 VPS26BQ4G0F5 336 aa20.51■□□□□ 0.87
COL13A1-202ENST00000357811 ARTNQ5T4W7 220 aa20.51■□□□□ 0.87
COL13A1-202ENST00000357811 MANEALQ5VSG8 457 aa20.51■□□□□ 0.87
COL13A1-202ENST00000357811 OR13C4Q8NGS5 318 aa20.51■□□□□ 0.87
COL13A1-202ENST00000357811 SYT17Q9BSW7 474 aa20.51■□□□□ 0.87
COL13A1-202ENST00000357811 GSTO2Q9H4Y5 243 aa20.51■□□□□ 0.87
COL13A1-202ENST00000357811 TBC1D30Q9Y2I9 924 aa20.51■□□□□ 0.87
COL13A1-202ENST00000357811 GIT1Q9Y2X7 761 aa20.51■□□□□ 0.87
COL13A1-202ENST00000357811 NYNRINQ9P2P1 1898 aaKnown RBP20.51■□□□□ 0.87
COL13A1-202ENST00000357811 A0A1B0GTL3 188 aa20.51■□□□□ 0.87
COL13A1-202ENST00000357811 NCF1BA6NI72 391 aaPredicted RBP20.51■□□□□ 0.87
COL13A1-202ENST00000357811 NCF1CA8MVU1 366 aaPredicted RBP20.51■□□□□ 0.87
COL13A1-202ENST00000357811 UBXN8O00124 270 aa20.51■□□□□ 0.87
COL13A1-202ENST00000357811 NCF1P14598 390 aaPredicted RBP20.51■□□□□ 0.87
COL13A1-202ENST00000357811 GRIA3P42263 894 aa20.51■□□□□ 0.87
COL13A1-202ENST00000357811 LRP8Q14114 963 aa20.51■□□□□ 0.87
COL13A1-202ENST00000357811 MYLK3Q32MK0 819 aa20.51■□□□□ 0.87
COL13A1-202ENST00000357811 SIRPB2Q5JXA9 342 aa20.51■□□□□ 0.87
COL13A1-202ENST00000357811 DCBLD1Q8N8Z6 715 aa20.51■□□□□ 0.87
COL13A1-202ENST00000357811 PRICKLE1Q96MT3 831 aaPredicted RBP20.51■□□□□ 0.87
COL13A1-202ENST00000357811 SENP6Q9GZR1 1112 aaPredicted RBP20.51■□□□□ 0.87
COL13A1-202ENST00000357811 SMOC2Q9H3U7 446 aa20.51■□□□□ 0.87
COL13A1-202ENST00000357811 SNRPB2P08579 225 aaKnown RBP20.5■□□□□ 0.87
COL13A1-202ENST00000357811 ALDOCP09972 364 aaKnown RBP20.5■□□□□ 0.87
COL13A1-202ENST00000357811 CES1P23141 567 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 MLLT6P55198 1093 aaPredicted RBP20.5■□□□□ 0.87
COL13A1-202ENST00000357811 TIGD7Q6NT04 549 aaPredicted RBP20.5■□□□□ 0.87
COL13A1-202ENST00000357811 SCIMPQ6UWF3 145 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 IFNEQ86WN2 208 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 ZNF280BQ86YH2 543 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 THEM5Q8N1Q8 247 aa20.5■□□□□ 0.87
COL13A1-202ENST00000357811 ATAD1Q8NBU5 361 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms