RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 DET1Q7L5Y6 550 aa3.82□□□□□ -1.8
SMC1B-201ENST00000357450 BNIPLQ7Z465 357 aa3.82□□□□□ -1.8
SMC1B-201ENST00000357450 ZC3H18Q86VM9 953 aaKnown RBP3.82□□□□□ -1.8
SMC1B-201ENST00000357450 EHBP1Q8NDI1 1231 aa3.82□□□□□ -1.8
SMC1B-201ENST00000357450 IPMKQ8NFU5 416 aa3.82□□□□□ -1.8
SMC1B-201ENST00000357450 SUN3Q8TAQ9 357 aa3.82□□□□□ -1.8
SMC1B-201ENST00000357450 KAT5Q92993 513 aa3.82□□□□□ -1.8
SMC1B-201ENST00000357450 NAT6Q93015 286 aa3.82□□□□□ -1.8
SMC1B-201ENST00000357450 CAVIN3Q969G5 261 aa3.82□□□□□ -1.8
SMC1B-201ENST00000357450 TSNARE1Q96NA8 513 aa3.82□□□□□ -1.8
SMC1B-201ENST00000357450 ELF4Q99607 663 aaPredicted RBP3.82□□□□□ -1.8
SMC1B-201ENST00000357450 ZYG11BQ9C0D3 744 aa3.82□□□□□ -1.8
SMC1B-201ENST00000357450 CDH19Q9H159 772 aa3.82□□□□□ -1.8
SMC1B-201ENST00000357450 RUBCNLQ9H714 662 aa3.82□□□□□ -1.8
SMC1B-201ENST00000357450 WDR26Q9H7D7 661 aa3.82□□□□□ -1.8
SMC1B-201ENST00000357450 USP29Q9HBJ7 922 aa3.82□□□□□ -1.8
SMC1B-201ENST00000357450 PFDN4Q9NQP4 134 aa3.82□□□□□ -1.8
SMC1B-201ENST00000357450 UBP1Q9NZI7 540 aa3.82□□□□□ -1.8
SMC1B-201ENST00000357450 HMGXB4Q9UGU5 601 aa3.82□□□□□ -1.8
SMC1B-201ENST00000357450 ADAM21Q9UKJ8 722 aa3.82□□□□□ -1.8
SMC1B-201ENST00000357450 PSMD13Q9UNM6 376 aa3.82□□□□□ -1.8
SMC1B-201ENST00000357450 COQ6Q9Y2Z9 468 aa3.82□□□□□ -1.8
SMC1B-201ENST00000357450 SNX10Q9Y5X0 201 aa3.82□□□□□ -1.8
SMC1B-201ENST00000357450 MAD1L1Q9Y6D9 718 aa3.82□□□□□ -1.8
SMC1B-201ENST00000357450 HECTD1Q9ULT8 2610 aa3.82□□□□□ -1.8
SMC1B-201ENST00000357450 IGLON5A6NGN9 336 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 TRIM64BA6NI03 449 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 TLR4O00206 839 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 FSCN2O14926 492 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 SERPINF2P08697 491 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 ALPIP09923 528 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 ACP5P13686 325 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 GPD1P21695 349 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 ARRB2P32121 409 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 RPS15P62841 145 aaKnown RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 RACK1P63244 317 aaKnown RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 LY6DQ14210 128 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 EML3Q32P44 896 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 TMEM196Q5HYL7 178 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 KCNT1Q5JUK3 1230 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 RAB11FIP2Q7L804 512 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 C11orf96Q7Z7L8 435 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 CEP112Q8N8E3 955 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 GPR156Q8NFN8 814 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 MRGPRX1Q96LB2 322 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 SMOQ99835 787 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 SGK2Q9HBY8 427 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 HACD3Q9P035 362 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 PADI4Q9UM07 663 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 RPS6KL1Q9Y6S9 549 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 SCN10AQ9Y5Y9 1956 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 PKDREJQ9NTG1 2253 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 EFCAB8A8MWE9 144 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 ISM1B1AKI9 464 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 E5RI56 91 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 M0QZQ0 153 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 XPO1O14980 1071 aaKnown RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 POLR1CO15160 346 aaPredicted RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 POP4O95707 220 aaKnown RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 MT-CO3P00414 261 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 SKILP12757 684 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 FERP16591 822 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 GABRG2P18507 467 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 CD27P26842 260 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 CD70P32970 193 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 EIF4A3P38919 411 aaKnown RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 NBL1P41271 181 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 RPS9P46781 194 aaKnown RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 CCNHP51946 323 aaPredicted RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 MAXP61244 160 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 NKX3-2P78367 333 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 KLF1Q13351 362 aaPredicted RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 AUHQ13825 339 aaKnown RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 TRIP4Q15650 581 aaPredicted RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 PHKG1Q16816 387 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 LONRF2Q1L5Z9 754 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 DEFB109BQ30KR1 87 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 TCP11X2Q5H9J9 407 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 PIK3R6Q5UE93 754 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 DENND1BQ6P3S1 775 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 TTC27Q6P3X3 843 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 SLC39A4Q6P5W5 647 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 TAC4Q86UU9 113 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 VASH2Q86V25 355 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 KRTAP19-1Q8IUB9 90 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 LSMEM2Q8N112 164 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 ARFGAP1Q8N6T3 406 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 TRIM58Q8NG06 486 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 ARL8AQ96BM9 186 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 BIRC7Q96CA5 298 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 AP2M1Q96CW1 435 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 VPS50Q96JG6 964 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 HSFY1Q96LI6 401 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 CFAP57Q96MR6 1250 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 CEP63Q96MT8 703 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 FOPNLQ96NB1 174 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 PSMB7Q99436 277 aa3.81□□□□□ -1.8
SMC1B-201ENST00000357450 HNRNPABQ99729 332 aaKnown RBP3.81□□□□□ -1.8
SMC1B-201ENST00000357450 DESI2Q9BSY9 194 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms