RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 NUP205Q92621 2012 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 FAM95CA0A1B0GW59 222 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 A0A1W2PPW3 197 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 HEATR9A2RTY3 570 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 TBKBP1A7MCY6 615 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 TMX2-CTNND1H3BSU7 103 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 ACOT8O14734 319 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 UBDO15205 165 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 PMPCBO75439 489 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 MTRF1O75570 445 aaKnown RBP8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 ATE1O95260 518 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 GNAO1P09471 354 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 SBK3P0C264 359 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 YWHAQP27348 245 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 ADSLP30566 484 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 SLC7A2P52569 658 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 LAMC2Q13753 1193 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 PCSK7Q16549 785 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 FBXO47Q5MNV8 452 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 TTC33Q6PID6 262 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 STRADAQ7RTN6 431 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 LSMEM2Q8N112 164 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 SLC15A4Q8N697 577 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 APPL2Q8NEU8 664 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 BEST2Q8NFU1 509 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 CANT1Q8WVQ1 401 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 CENPIQ92674 756 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 RPL10LQ96L21 214 aaKnown RBP8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 C12orf42Q96LP6 360 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 MLPHQ9BV36 600 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 FBRSL1Q9HCM7 1045 aaKnown RBP8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 CDC14AQ9UNH5 594 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 ARIH1Q9Y4X5 557 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 PTPRFP10586 1907 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 MRASO14807 208 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 H2AFYO75367 372 aaKnown RBP8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 CRYZL1O95825 349 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 MT-ND1P03886 318 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 FYNP06241 537 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 CD68P34810 354 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 TKTL1P51854 596 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 TPTEP56180 551 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 FAM83EQ2M2I3 478 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 ZNF470Q6ECI4 717 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 ESRP1Q6NXG1 681 aaKnown RBP8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 CNSTQ6PJW8 725 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 NEK10Q6ZWH5 1172 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 PDZD4Q76G19 769 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 CLEC14AQ86T13 490 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 CENPLQ8N0S6 344 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 TXNDC5Q8NBS9 432 aaKnown RBP8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 AFG1LQ8WV93 481 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 ASB9Q96DX5 294 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 EFHD1Q9BUP0 239 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 HERC2P3Q9BVR0 1158 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 CDHR5Q9HBB8 845 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 HACD3Q9P035 362 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 VTI1BQ9UEU0 232 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 SLC2A6Q9UGQ3 507 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 PCDHGA7Q9Y5G6 932 aa8.28□□□□□ -1.08
CDC42SE1-201ENST00000357235 SCN1AP35498 2009 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 C1orf232A0A0U1RR37 186 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 CENPBD1B2RD01 187 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 H3BNH8 94 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 NRP1O14786 923 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 AURKAO14965 403 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 TADA2AO75478 443 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 RECQL4O94761 1208 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 APOA4P06727 396 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 C8BP07358 591 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 CYP2C8P10632 490 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 EDNRBP24530 442 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 GABRB3P28472 473 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 CASP2P42575 452 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 IST1P53990 364 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 C1QTNF8P60827 252 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 GNA12Q03113 381 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 STX5Q13190 355 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 VGLL4Q14135 290 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 TTLL4Q14679 1199 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 SUZ12Q15022 739 aaKnown RBP8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 REP15Q6BDI9 236 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 RNF19BQ6ZMZ0 732 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 CHST15Q7LFX5 561 aaPredicted RBP8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 HEATR4Q86WZ0 1026 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 TICAM1Q8IUC6 712 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 RIOX2Q8IUF8 465 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 TMEM126BQ8IUX1 230 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 OFCC1Q8IZS5 231 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 CPSF7Q8N684 471 aaKnown RBP8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 KDM1BQ8NB78 822 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 OSMRQ99650 979 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 PSD2Q9BQI7 771 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 SLC2A11Q9BYW1 496 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 IL22Q9GZX6 179 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 UPF3AQ9H1J1 476 aaKnown RBP8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 RHOJQ9H4E5 214 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 PLEKHA5Q9HAU0 1116 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 SPAG4Q9NPE6 437 aa8.27□□□□□ -1.08
CDC42SE1-201ENST00000357235 GIMAP2Q9UG22 337 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms