RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 TMEM40Q8WWA1 233 aa13.41□□□□□ -0.26
NCDN-201ENST00000356090 HDAC10Q969S8 669 aa13.41□□□□□ -0.26
NCDN-201ENST00000356090 C19orf60Q96EN9 201 aa13.41□□□□□ -0.26
NCDN-201ENST00000356090 VAT1Q99536 393 aa13.41□□□□□ -0.26
NCDN-201ENST00000356090 SMOQ99835 787 aa13.41□□□□□ -0.26
NCDN-201ENST00000356090 KIFC1Q9BW19 673 aa13.41□□□□□ -0.26
NCDN-201ENST00000356090 J3QRK9 145 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 CNMDO75829 334 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 GEMP55040 296 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 WNT3AP56704 352 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 BNIP3Q12983 259 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 PTPRCAPQ14761 206 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 ERO1BQ86YB8 467 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 ESAMQ96AP7 390 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 SLCO4A1Q96BD0 722 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 FBXL8Q96CD0 374 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 ISOC1Q96CN7 298 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 ZNF597Q96LX8 424 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 C3orf30Q96M34 536 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 GAD1Q99259 594 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 C1orf50Q9BV19 199 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 TRIM15Q9C019 465 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 BRD8Q9H0E9 1235 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 CRTAC1Q9NQ79 661 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 SLC8A2Q9UPR5 921 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 NDUFAF1Q9Y375 327 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 TCAF1Q9Y4C2 921 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 PIRO00625 290 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 NPHS1O60500 1241 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 TSPAN3O60637 253 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 HLA-DQB2P05538 268 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 CD86P42081 329 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 GALNT2Q10471 571 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 LRP8Q14114 963 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 RABL3Q5HYI8 236 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 DUS1LQ6P1R4 473 aaKnown RBP13.4□□□□□ -0.26
NCDN-201ENST00000356090 PAQR9Q6ZVX9 377 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 ZNF554Q86TJ5 538 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 PAF1Q8N7H5 531 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 SCAMP5Q8TAC9 235 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 ISL2Q96A47 359 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 FAR2Q96K12 515 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 RNF145Q96MT1 663 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 PLEKHG4BQ96PX9 1271 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 HBEGFQ99075 208 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 RGS18Q9NS28 235 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 NDFIP2Q9NV92 336 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 KCTD3Q9Y597 815 aa13.4□□□□□ -0.26
NCDN-201ENST00000356090 CENPFP49454 3210 aa13.4□□□□□ -0.27
NCDN-201ENST00000356090 A0A087X1B8 175 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 C1orf232A0A0U1RR37 186 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 SUPT3HB4E1H0 165 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 RBP1P09455 135 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 COL6A2P12110 1019 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 HECTD2Q5U5R9 776 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 PPTC7Q8NI37 304 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 SLC39A8Q9C0K1 460 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 CCDC90BQ9GZT6 254 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 AKTIPQ9H8T0 292 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 FAM50BQ9Y247 325 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 IPPQ9Y573 584 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 FADS3Q9Y5Q0 445 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 NRCAMQ92823 1304 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 PIP5K1BO14986 540 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 HMBSP08397 361 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 PIM1P11309 404 aaPredicted RBP13.39□□□□□ -0.27
NCDN-201ENST00000356090 IL1RL1Q01638 556 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 MARCH8Q5T0T0 291 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 KIAA0319Q5VV43 1072 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 CLEC4FQ8N1N0 589 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 KLHL23Q8NBE8 558 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 ARRDC4Q8NCT1 418 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 GABPB2Q8TAK5 448 aaPredicted RBP13.39□□□□□ -0.27
NCDN-201ENST00000356090 NSUN5Q96P11 429 aaKnown RBP13.39□□□□□ -0.27
NCDN-201ENST00000356090 OSBPL6Q9BZF3 934 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 NAA50Q9GZZ1 169 aaKnown RBP13.39□□□□□ -0.27
NCDN-201ENST00000356090 PLGRKTQ9HBL7 147 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 SARS2Q9NP81 518 aaKnown RBP13.39□□□□□ -0.27
NCDN-201ENST00000356090 TMEM30AQ9NV96 361 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 UTP6Q9NYH9 597 aaKnown RBP13.39□□□□□ -0.27
NCDN-201ENST00000356090 CPA4Q9UI42 421 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 VPS28Q9UK41 221 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 SLC22A2O15244 555 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 F9P00740 461 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 HSPA1AP0DMV8 641 aaKnown RBP13.39□□□□□ -0.27
NCDN-201ENST00000356090 HSPA1BP0DMV9 641 aaKnown RBP13.39□□□□□ -0.27
NCDN-201ENST00000356090 OXTRP30559 389 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 SCNN1AP37088 669 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 AFF1P51825 1210 aaKnown RBP13.39□□□□□ -0.27
NCDN-201ENST00000356090 HK2P52789 917 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 POU4F1Q01851 419 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 GRB7Q14451 532 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 RFTN1Q14699 578 aaPredicted RBP13.39□□□□□ -0.27
NCDN-201ENST00000356090 OGFOD2Q6N063 350 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 RETREG3Q86VR2 466 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 TMEM126BQ8IUX1 230 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 DHRSXQ8N5I4 330 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 RIN3Q8TB24 985 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 HMGCLL1Q8TB92 370 aa13.39□□□□□ -0.27
NCDN-201ENST00000356090 VWA7Q9Y334 891 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms