RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 XKR6Q5GH73 641 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 DNAJB14Q8TBM8 379 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 SNX27Q96L92 541 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 GOLGA2P5Q9HBQ8 144 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 SSU72Q9NP77 194 aaKnown RBP16.41■□□□□ 0.22
SHTN1-202ENST00000355371 SLIT2O94813 1529 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 ZMPSTE24O75844 475 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 GNRH1P01148 92 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 TARBP2Q15633 366 aaKnown RBP16.41■□□□□ 0.22
SHTN1-202ENST00000355371 BNIPLQ7Z465 357 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 ALYREFQ86V81 257 aaKnown RBP16.41■□□□□ 0.22
SHTN1-202ENST00000355371 ULK2Q8IYT8 1036 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 RCN3Q96D15 328 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 NTPCRQ9BSD7 190 aaKnown RBP16.41■□□□□ 0.22
SHTN1-202ENST00000355371 ZNF232Q9UNY5 417 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 PCDHB9Q9Y5E1 797 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 PCDHB1Q9Y5F3 818 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 KPNA4O00629 521 aaPredicted RBP16.41■□□□□ 0.22
SHTN1-202ENST00000355371 GCATO75600 419 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 LYPLA1O75608 230 aaPredicted RBP16.41■□□□□ 0.22
SHTN1-202ENST00000355371 HNRNPLP14866 589 aaKnown RBP eCLIP16.41■□□□□ 0.226e-8■■■□□ 17.4
SHTN1-202ENST00000355371 OR1D2P34982 312 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 SMIM11AP58511 58 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 POU5F1Q01860 360 aaKnown RBP16.41■□□□□ 0.22
SHTN1-202ENST00000355371 TAF10Q12962 218 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 TRIM71Q2Q1W2 868 aaKnown RBP16.41■□□□□ 0.22
SHTN1-202ENST00000355371 CMC1Q7Z7K0 106 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 EXOC2Q96KP1 924 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 KLHL5Q96PQ7 755 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 VPS4AQ9UN37 437 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 SATB2Q9UPW6 733 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 GPR25O00155 361 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 PIAS1O75925 651 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 AP2A1O95782 977 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 FEN1P39748 380 aaKnown RBP16.41■□□□□ 0.22
SHTN1-202ENST00000355371 GLUD2P49448 558 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 ADGRD1Q6QNK2 874 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 GPR180Q86V85 440 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 PROSER1Q86XN7 944 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 SMAD5Q99717 465 aaKnown RBP16.41■□□□□ 0.22
SHTN1-202ENST00000355371 ACBD6Q9BR61 282 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 SDCBP2Q9H190 292 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 BRD9Q9H8M2 597 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 TRAF6Q9Y4K3 522 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 ARIH1Q9Y4X5 557 aaPredicted RBP16.41■□□□□ 0.22
SHTN1-202ENST00000355371 KCNE2Q9Y6J6 123 aa16.41■□□□□ 0.22
SHTN1-202ENST00000355371 PIK3C2AO00443 1686 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 CENPXA8MT69 81 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 DUSP11O75319 330 aaKnown RBP16.4■□□□□ 0.22
SHTN1-202ENST00000355371 UQCRBP14927 111 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 CTPS1P17812 591 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 JAK1P23458 1154 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 RAB14P61106 215 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 XIAPP98170 497 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 TRAF3Q13114 568 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 CUZD1Q86UP6 607 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 ITCHQ96J02 903 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 C12orf42Q96LP6 360 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 MECRQ9BV79 373 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 C2P06681 752 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 TSPAN19P0C672 248 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 LAG3P18627 525 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 FGFR3P22607 806 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 PPIBP23284 216 aaKnown RBP16.4■□□□□ 0.22
SHTN1-202ENST00000355371 ANXA8L1Q5VT79 327 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 VN1R5Q7Z5H4 357 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 SPATA19Q7Z5L4 167 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 AHCYL2Q96HN2 611 aaKnown RBP16.4■□□□□ 0.22
SHTN1-202ENST00000355371 ZFP14Q9HCL3 533 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 STXBP5LQ9Y2K9 1186 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 KRT36O76013 467 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 SELPP16109 830 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 GSSP48637 474 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 DGKKQ5KSL6 1271 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 DRICH1Q6PGQ1 229 aaPredicted RBP16.4■□□□□ 0.22
SHTN1-202ENST00000355371 GCNT7Q6ZNI0 430 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 EIF3MQ7L2H7 374 aaKnown RBP16.4■□□□□ 0.22
SHTN1-202ENST00000355371 APTXQ7Z2E3 356 aaKnown RBP16.4■□□□□ 0.22
SHTN1-202ENST00000355371 CACUL1Q86Y37 369 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 TCAIMQ8N3R3 496 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 SPATA6LQ8N4H0 392 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 C7orf26Q96N11 449 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 SLC4A5Q9BY07 1137 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 C6orf62Q9GZU0 229 aaPredicted RBP16.4■□□□□ 0.22
SHTN1-202ENST00000355371 CAB39LQ9H9S4 337 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 PNPOQ9NVS9 261 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 E9PAM4 449 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 ENTPD5O75356 428 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 CTSEP14091 401 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 GBE1Q04446 702 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 TRIQKQ629K1 86 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 PMF1Q6P1K2 205 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 CENPIQ92674 756 aaPredicted RBP16.4■□□□□ 0.22
SHTN1-202ENST00000355371 IFT172Q9UG01 1749 aa16.4■□□□□ 0.22
SHTN1-202ENST00000355371 LINC00854A0A1B0GVQ3 168 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 SMIM31A0A1B0GVY4 71 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 GRM6O15303 877 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 TREHO43280 583 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 MSI1O43347 362 aaKnown RBP16.39■□□□□ 0.21
SHTN1-202ENST00000355371 L1CAMP32004 1257 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms