RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 LRTOMTQ8WZ04 291 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 ELMO3Q96BJ8 720 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 SMARCD1Q96GM5 515 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 FBXO44Q9H4M3 255 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 CD320Q9NPF0 282 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 TRPV5Q9NQA5 729 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 ATP6AP2A0A1C7CYW4 349 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 ATP6AP2O75787 350 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 ERBB2P04626 1255 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 CYP3A4P08684 503 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 LINC00032P0C843 101 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 CCNB1P14635 433 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 OR1E1P30953 314 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 SCRN3Q0VDG4 424 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 NFE2Q16621 373 aaPredicted RBP12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 TEX47Q8TBZ9 253 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 TP53INP1Q96A56 240 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 MTFMTQ96DP5 389 aaKnown RBP12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 C12orf4Q9NQ89 552 aa12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 TLR8Q9NR97 1041 aaKnown RBP12.76□□□□□ -0.37
SYNCRIP-201ENST00000355238 RFXANKO14593 260 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 OR10H3O60404 316 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 KPNA6O60684 536 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 C9P02748 559 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 OMPP47874 163 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 RALGDSQ12967 914 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 RETSATQ6NUM9 610 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 ZC3H7AQ8IWR0 971 aaKnown RBP12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 DRAXINQ8NBI3 349 aaPredicted RBP12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 FCGR1BQ92637 280 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 ROPN1LQ96C74 230 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 OR52E6Q96RD3 313 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 PDCD2LQ9BRP1 358 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 COLEC11Q9BWP8 271 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 TAS2R1Q9NYW7 299 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 ZNF232Q9UNY5 417 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 PRMT5O14744 637 aaPredicted RBP12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 PRKD3O94806 890 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 NFKB1P19838 968 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 PTPN3P26045 913 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 CTSKP43235 329 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 CDH8P55286 799 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 GTF2BQ00403 316 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 IRF8Q02556 426 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 HGSNATQ68CP4 663 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 C1GALT1C1Q96EU7 318 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 RTFDC1Q9BY42 306 aaPredicted RBP12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 THP07101 528 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 TPSB2P20231 275 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 BOP1Q14137 746 aaKnown RBP12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 TPSAB1Q15661 275 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 OLFML2AQ68BL7 652 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 TFAP2DQ7Z6R9 452 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 PJA1Q8NG27 643 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 YTHDF1Q9BYJ9 559 aaKnown RBP12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 ZCCHC2Q9C0B9 1178 aaKnown RBP12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 QTRT2Q9H974 415 aaKnown RBP12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 PREBQ9HCU5 417 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 ZNRF3Q9ULT6 936 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 ST3GAL5Q9UNP4 418 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 TMX2Q9Y320 296 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 CCDC189A1A4V9 331 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 NOTOA8MTQ0 251 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 SLC22A1O15245 554 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 CHST10O43529 356 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 ZBED5Q49AG3 693 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 TIGD2Q4W5G0 525 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 AFTPHQ6ULP2 937 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 UBE2E3Q969T4 207 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 TKTL2Q9H0I9 626 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 FETUBQ9UGM5 382 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 ENTPD4Q9Y227 616 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 ZNF879B4DU55 563 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 GTF2E2P29084 291 aaKnown RBP12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 NTSP30990 170 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 CPT1AP50416 773 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 SOX10P56693 466 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 GALNT3Q14435 633 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 CYP2A13Q16696 494 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 NADK2Q4G0N4 442 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 REP15Q6BDI9 236 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 TRIM40Q6P9F5 258 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 ADAMTSL2Q86TH1 951 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 C10orf82Q8WW14 230 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 LENG8Q96PV6 779 aaPredicted RBP12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 PANX1Q96RD7 426 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 KCNMB3Q9NPA1 279 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 PCDHGC3Q9UN70 934 aa12.75□□□□□ -0.37
SYNCRIP-201ENST00000355238 ROBO3Q96MS0 1386 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 KLHL33A6NCF5 533 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 ACKR2O00590 384 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 CYP7B1O75881 506 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 PGRP06401 933 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 TTPAP49638 278 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 KCNA10Q16322 511 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 ANXA8L1Q5VT79 327 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 CNSTQ6PJW8 725 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 USP43Q70EL4 1123 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 ADGRA1Q86SQ6 560 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 IRF2BP1Q8IU81 584 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms