RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 CXorf40AQ8TE69 158 aa12.21□□□□□ -0.45
SMAD9-201ENST00000350148 HDAC10Q969S8 669 aa12.21□□□□□ -0.45
SMAD9-201ENST00000350148 MRM3Q9HC36 420 aaKnown RBP12.21□□□□□ -0.45
SMAD9-201ENST00000350148 FBXO6Q9NRD1 293 aaPredicted RBP12.21□□□□□ -0.45
SMAD9-201ENST00000350148 STMN3Q9NZ72 180 aa12.21□□□□□ -0.45
SMAD9-201ENST00000350148 AHSPQ9NZD4 102 aa12.21□□□□□ -0.45
SMAD9-201ENST00000350148 RPL26L1Q9UNX3 145 aaKnown RBP12.21□□□□□ -0.45
SMAD9-201ENST00000350148 TBC1D3BA6NDS4 549 aa12.21□□□□□ -0.45
SMAD9-201ENST00000350148 BTN3A1O00481 513 aa12.21□□□□□ -0.45
SMAD9-201ENST00000350148 KPNA3O00505 521 aaPredicted RBP12.21□□□□□ -0.45
SMAD9-201ENST00000350148 ADAMTS4O75173 837 aa12.21□□□□□ -0.45
SMAD9-201ENST00000350148 FKBP6O75344 327 aa12.21□□□□□ -0.45
SMAD9-201ENST00000350148 BPGMP07738 259 aa12.21□□□□□ -0.45
SMAD9-201ENST00000350148 TRMT5Q32P41 509 aaKnown RBP12.21□□□□□ -0.45
SMAD9-201ENST00000350148 BNC2Q6ZN30 1099 aaPredicted RBP12.21□□□□□ -0.45
SMAD9-201ENST00000350148 OTOP3Q7RTS5 596 aa12.21□□□□□ -0.45
SMAD9-201ENST00000350148 TOX2Q96NM4 488 aa12.21□□□□□ -0.45
SMAD9-201ENST00000350148 KLHL5Q96PQ7 755 aa12.21□□□□□ -0.45
SMAD9-201ENST00000350148 C15orf38-AP3S2A0A0A6YYH1 394 aa12.21□□□□□ -0.46
SMAD9-201ENST00000350148 POP4O95707 220 aaKnown RBP12.21□□□□□ -0.46
SMAD9-201ENST00000350148 ANXA5P08758 320 aa12.21□□□□□ -0.46
SMAD9-201ENST00000350148 CCDC166P0CW27 439 aa12.21□□□□□ -0.46
SMAD9-201ENST00000350148 TARSP26639 723 aaKnown RBP12.21□□□□□ -0.46
SMAD9-201ENST00000350148 GDF10P55107 478 aa12.21□□□□□ -0.46
SMAD9-201ENST00000350148 GAD2Q05329 585 aa12.21□□□□□ -0.46
SMAD9-201ENST00000350148 CACNG1Q06432 222 aa12.21□□□□□ -0.46
SMAD9-201ENST00000350148 TGM3Q08188 693 aa12.21□□□□□ -0.46
SMAD9-201ENST00000350148 ELP6Q0PNE2 266 aa12.21□□□□□ -0.46
SMAD9-201ENST00000350148 ARPINQ7Z6K5 226 aa12.21□□□□□ -0.46
SMAD9-201ENST00000350148 A8MUI8 341 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 EDF1O60869 148 aaKnown RBP12.2□□□□□ -0.46
SMAD9-201ENST00000350148 ABL2P42684 1182 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 HSPA13P48723 471 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 MAXP61244 160 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 PRKD1Q15139 912 aaPredicted RBP12.2□□□□□ -0.46
SMAD9-201ENST00000350148 ARMC6Q6NXE6 501 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 HIPK4Q8NE63 616 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 ST13P5Q8NFI4 369 aaPredicted RBP12.2□□□□□ -0.46
SMAD9-201ENST00000350148 FAM81AQ8TBF8 368 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 INTS10Q9NVR2 710 aaKnown RBP12.2□□□□□ -0.46
SMAD9-201ENST00000350148 GMEB1Q9Y692 573 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 SCN9AQ15858 1988 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 PHGDHO43175 533 aaKnown RBP12.2□□□□□ -0.46
SMAD9-201ENST00000350148 ALKAL1Q6UXT8 129 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 RINLQ6ZS11 566 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 SCUBE1Q8IWY4 988 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 COLGALT2Q8IYK4 626 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 C7orf61Q8IZ16 206 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 TCAIMQ8N3R3 496 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 PQLC3Q8N755 202 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 ELOVL6Q9H5J4 265 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 ACTR8Q9H981 624 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.2□□□□□ -0.46
SMAD9-201ENST00000350148 C1orf232A0A0U1RR37 186 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 GRK3P35626 688 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 WNT7BP56706 349 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 TAF1AQ15573 450 aaPredicted RBP12.2□□□□□ -0.46
SMAD9-201ENST00000350148 RAB30Q15771 203 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 ATP6AP1LQ52LC2 224 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 MSANTD2Q6P1R3 559 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 FAM171BQ6P995 826 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 OOSP2Q86WS3 158 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 UBE2E3Q969T4 207 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 PPP1R36Q96LQ0 422 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 C7orf26Q96N11 449 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 KLHL25Q9H0H3 589 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 SLC28A3Q9HAS3 691 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 PRNPP04156 253 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 WEE1P30291 646 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 NUDT2P50583 147 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 MRPL28Q13084 256 aaKnown RBP12.2□□□□□ -0.46
SMAD9-201ENST00000350148 CNGA3Q16281 694 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 C6orf10Q5SRN2 563 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 SNX30Q5VWJ9 437 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 TXNRD3NBQ6F5E7 133 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 CPNE8Q86YQ8 564 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 BTBD10Q9BSF8 475 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 IL23AQ9NPF7 189 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 OPTCQ9UBM4 332 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 HS3ST4Q9Y661 456 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 A0A1B0GW55 424 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 ABLIM1O14639 778 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 CCL16O15467 120 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 PIGNO95427 931 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 UBTFL6P0CB48 400 aaPredicted RBP12.2□□□□□ -0.46
SMAD9-201ENST00000350148 DUX4L2P0CJ85 424 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 DUX4L3P0CJ86 424 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 DUX4L4P0CJ87 422 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 DUX4L5P0CJ88 424 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 DUX4L6P0CJ89 424 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 DUX4L7P0CJ90 424 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 ATXN1P54253 815 aaKnown RBP12.2□□□□□ -0.46
SMAD9-201ENST00000350148 PTPRNQ16849 979 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 CFAP52Q8N1V2 620 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 TTC30BQ8N4P2 665 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 KYQ8NBH2 561 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 CENPIQ92674 756 aaPredicted RBP12.2□□□□□ -0.46
SMAD9-201ENST00000350148 POP5Q969H6 163 aaKnown RBP12.2□□□□□ -0.46
SMAD9-201ENST00000350148 DUX4Q9UBX2 424 aa12.2□□□□□ -0.46
SMAD9-201ENST00000350148 COPG1Q9Y678 874 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms