RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 SNCBQ16143 134 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 HECTD2Q5U5R9 776 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 TMC7Q7Z402 723 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 SPNS2Q8IVW8 549 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ZNF781Q8N8C0 355 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 WFDC5Q8TCV5 224 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 MRPS31Q92665 395 aaKnown RBP14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 MRPL46Q9H2W6 279 aaKnown RBP14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ACSS2Q9NR19 701 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 VPS28Q9UK41 221 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 RIMKLBQ9ULI2 386 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 VWA7Q9Y334 891 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 A8MUI8 341 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CAPN14A8MX76 684 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ZNF195O14628 629 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CD3EAPO15446 510 aaKnown RBP14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 DLX3O60479 287 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ATP6V1G2O95670 118 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CRTAMO95727 393 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ATP5BP06576 529 aaKnown RBP14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 SERPINA6P08185 405 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ALOX15P16050 662 aaPredicted RBP14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CALB2P22676 271 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 NAGLUP54802 743 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 HTRA4P83105 476 aaPredicted RBP14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 USP4Q13107 963 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 TUBB3Q13509 450 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CDH18Q13634 790 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 MRNIPQ6NTE8 343 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 LILRA6Q6PI73 481 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 TREML1Q86YW5 311 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 TMC8Q8IU68 726 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 TTC8Q8TAM2 541 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 TSPAN17Q96FV3 270 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ZBED2Q9BTP6 218 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 LRRC3Q9BY71 257 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 FAM96AQ9H5X1 160 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 GPAMQ9HCL2 828 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 IGSF5Q9NSI5 407 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 BAIAP2L1Q9UHR4 511 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 APOBEC2Q9Y235 224 aaKnown RBP14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CRYL1Q9Y2S2 319 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 OR51B4Q9Y5P0 310 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 RAI2Q9Y5P3 530 aa14.17□□□□□ -0.14
CDK5RAP1-202ENST00000346416 PDE4DIPQ5VU43 2346 aa14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ANKRD36A6QL64 1941 aa14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 C8AP07357 584 aa14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ESRRAP11474 423 aaPredicted RBP14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 IDH3AP50213 366 aa14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 KPNA2P52292 529 aaKnown RBP14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 PRKAA2P54646 552 aa14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CDKN2DP55273 166 aa14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 NSUN2Q08J23 767 aaKnown RBP eCLIP14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 RIPK1Q13546 671 aa14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 FAM83EQ2M2I3 478 aa14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 INO80DQ53TQ3 878 aaPredicted RBP14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 GLT6D1Q7Z4J2 308 aa14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 FAM217AQ8IXS0 508 aa14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 LPCAT1Q8NF37 534 aa14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 GPR150Q8NGU9 434 aa14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 OR4L1Q8NH43 312 aa14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CLP1Q92989 425 aaKnown RBP14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CDKN2AIPNLQ96HQ2 116 aa14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 SMIM14Q96QK8 99 aa14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 MRPL57Q9BQC6 102 aaKnown RBP14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 DRC3Q9H069 523 aa14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 DNAJC28Q9NX36 388 aa14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 VPS51Q9UID3 782 aa14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 LSM7Q9UK45 103 aaKnown RBP14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 DENND4CQ5VZ89 1909 aa14.16□□□□□ -0.14
CDK5RAP1-202ENST00000346416 NRG2O14511 850 aaPredicted RBP14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CSPG5O95196 566 aa14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ADH1AP07327 375 aa14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CHRNGP07510 517 aa14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CCDC166P0CW27 439 aa14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 GJA1P17302 382 aa14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CSKP41240 450 aa14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 MNAT1P51948 309 aa14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ZNF140P52738 457 aaPredicted RBP14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 SEMA3AQ14563 771 aa14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 VWA5B1Q5TIE3 1220 aa14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ICE2Q659A1 982 aa14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CCDC149Q6ZUS6 474 aa14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 LONP2Q86WA8 852 aa14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 KREMEN2Q8NCW0 462 aa14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 MDGA1Q8NFP4 955 aa14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 AGR3Q8TD06 166 aa14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 DDI1Q8WTU0 396 aa14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 PDCD6IPQ8WUM4 868 aaKnown RBP14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 SGF29Q96ES7 293 aa14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 UBXN10Q96LJ8 280 aa14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 MIPEPQ99797 713 aa14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ILKAPQ9H0C8 392 aaPredicted RBP14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CDH19Q9H159 772 aa14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CATSPERZQ9NTU4 200 aa14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 NLE1Q9NVX2 485 aaPredicted RBP14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CFAP97Q9P2B7 532 aa14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 A0A1W2PRU2 124 aa14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ANKRD66B4E2M5 251 aa14.15□□□□□ -0.14
CDK5RAP1-202ENST00000346416 FGBP02675 491 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms