RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 CCT6BQ92526 530 aa25.34■■□□□ 1.65
TRADD-201ENST00000345057 ISG20Q96AZ6 181 aaKnown RBP25.34■■□□□ 1.65
TRADD-201ENST00000345057 LMLNQ96KR4 655 aa25.34■■□□□ 1.65
TRADD-201ENST00000345057 NSMCE3Q96MG7 304 aa25.34■■□□□ 1.65
TRADD-201ENST00000345057 MECRQ9BV79 373 aa25.34■■□□□ 1.65
TRADD-201ENST00000345057 BBS2Q9BXC9 721 aa25.34■■□□□ 1.65
TRADD-201ENST00000345057 TLE6Q9H808 572 aa25.34■■□□□ 1.65
TRADD-201ENST00000345057 FBXO6Q9NRD1 293 aaPredicted RBP25.34■■□□□ 1.65
TRADD-201ENST00000345057 SLC25A13Q9UJS0 675 aa25.34■■□□□ 1.65
TRADD-201ENST00000345057 CD3EAPO15446 510 aaKnown RBP25.33■■□□□ 1.65
TRADD-201ENST00000345057 FZD6O60353 706 aa25.33■■□□□ 1.65
TRADD-201ENST00000345057 SOCS5O75159 536 aa25.33■■□□□ 1.65
TRADD-201ENST00000345057 MT-CO1P00395 513 aa25.33■■□□□ 1.65
TRADD-201ENST00000345057 GOT2P00505 430 aaKnown RBP25.33■■□□□ 1.65
TRADD-201ENST00000345057 BCL2L1Q07817 233 aa25.33■■□□□ 1.65
TRADD-201ENST00000345057 DLG2Q15700 870 aa25.33■■□□□ 1.65
TRADD-201ENST00000345057 ZNF697Q5TEC3 545 aa25.33■■□□□ 1.65
TRADD-201ENST00000345057 AFTPHQ6ULP2 937 aa25.33■■□□□ 1.65
TRADD-201ENST00000345057 RBM23Q86U06 439 aaKnown RBP25.33■■□□□ 1.65
TRADD-201ENST00000345057 TMEM25Q86YD3 366 aa25.33■■□□□ 1.65
TRADD-201ENST00000345057 SLC41A1Q8IVJ1 513 aa25.33■■□□□ 1.65
TRADD-201ENST00000345057 SMG7Q92540 1137 aaKnown RBP25.33■■□□□ 1.65
TRADD-201ENST00000345057 NMRAL1Q9HBL8 299 aa25.33■■□□□ 1.65
TRADD-201ENST00000345057 CATSPERZQ9NTU4 200 aa25.33■■□□□ 1.65
TRADD-201ENST00000345057 CLEC4EQ9ULY5 219 aa25.33■■□□□ 1.65
TRADD-201ENST00000345057 KCTD3Q9Y597 815 aa25.33■■□□□ 1.65
TRADD-201ENST00000345057 PAPLNO95428 1278 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 PRAMEF12O95522 483 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 PRKCGP05129 697 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 PDHA1P08559 390 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 PIRTP0C851 137 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 CPA3P15088 417 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 SAT1P21673 171 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 SNRPD1P62314 119 aaKnown RBP25.32■■□□□ 1.64
TRADD-201ENST00000345057 IRX4P78413 519 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 NTHL1P78549 312 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 STX3Q13277 289 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 CELF5Q8N6W0 485 aaKnown RBP25.32■■□□□ 1.64
TRADD-201ENST00000345057 MYO19Q96H55 970 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 CDKN2AIPNLQ96HQ2 116 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 SLC2A11Q9BYW1 496 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 MARK1Q9P0L2 795 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 HS3ST2Q9Y278 367 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 SPO11Q9Y5K1 396 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 NEDD8-MDP1E9PL57 170 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 PFDN6O15212 129 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 H2AFYO75367 372 aaKnown RBP25.32■■□□□ 1.64
TRADD-201ENST00000345057 F7P08709 466 aaPredicted RBP25.32■■□□□ 1.64
TRADD-201ENST00000345057 SLC35E2BP0CK96 405 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 BST1Q10588 318 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 PCLAFQ15004 111 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 CNSTQ6PJW8 725 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 ARID3BQ8IVW6 561 aaPredicted RBP25.32■■□□□ 1.64
TRADD-201ENST00000345057 ACVR1CQ8NER5 493 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 OR13C4Q8NGS5 318 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 C19orf43Q9BQ61 176 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 CEP44Q9C0F1 390 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 ATP13A3Q9H7F0 1226 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 INTS10Q9NVR2 710 aaKnown RBP25.32■■□□□ 1.64
TRADD-201ENST00000345057 THAP1Q9NVV9 213 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 INTS6Q9UL03 887 aaKnown RBP25.32■■□□□ 1.64
TRADD-201ENST00000345057 VPS9D1Q9Y2B5 631 aa25.32■■□□□ 1.64
TRADD-201ENST00000345057 CCDC162PA2VCL2 907 aa25.31■■□□□ 1.64
TRADD-201ENST00000345057 DCTN3O75935 186 aa25.31■■□□□ 1.64
TRADD-201ENST00000345057 PGLSO95336 258 aa25.31■■□□□ 1.64
TRADD-201ENST00000345057 CEBPBP17676 345 aa25.31■■□□□ 1.64
TRADD-201ENST00000345057 HLA-FP30511 346 aa25.31■■□□□ 1.64
TRADD-201ENST00000345057 MAGEA10P43363 369 aaPredicted RBP25.31■■□□□ 1.64
TRADD-201ENST00000345057 SF3A3Q12874 501 aaKnown RBP eCLIP25.31■■□□□ 1.64
TRADD-201ENST00000345057 LACTB2Q53H82 288 aaPredicted RBP25.31■■□□□ 1.64
TRADD-201ENST00000345057 ATXN7L2Q5T6C5 722 aaPredicted RBP25.31■■□□□ 1.64
TRADD-201ENST00000345057 FAM45BPQ6NSW5 357 aa25.31■■□□□ 1.64
TRADD-201ENST00000345057 MDGA1Q8NFP4 955 aa25.31■■□□□ 1.64
TRADD-201ENST00000345057 TTC8Q8TAM2 541 aa25.31■■□□□ 1.64
TRADD-201ENST00000345057 FAM45AQ8TCE6 357 aa25.31■■□□□ 1.64
TRADD-201ENST00000345057 TCF12Q99081 682 aa25.31■■□□□ 1.64
TRADD-201ENST00000345057 OMDQ99983 421 aa25.31■■□□□ 1.64
TRADD-201ENST00000345057 TM6SF2Q9BZW4 377 aa25.31■■□□□ 1.64
TRADD-201ENST00000345057 SFXN1Q9H9B4 322 aa25.31■■□□□ 1.64
TRADD-201ENST00000345057 ACTR5Q9H9F9 607 aaPredicted RBP25.31■■□□□ 1.64
TRADD-201ENST00000345057 MAGEE1Q9HCI5 957 aa25.31■■□□□ 1.64
TRADD-201ENST00000345057 PCDHB9Q9Y5E1 797 aa25.31■■□□□ 1.64
TRADD-201ENST00000345057 K7ERQ8 282 aa25.3■■□□□ 1.64
TRADD-201ENST00000345057 S1PR4O95977 384 aa25.3■■□□□ 1.64
TRADD-201ENST00000345057 GSRP00390 522 aa25.3■■□□□ 1.64
TRADD-201ENST00000345057 SERPINE1P05121 402 aa25.3■■□□□ 1.64
TRADD-201ENST00000345057 PRKAA2P54646 552 aa25.3■■□□□ 1.64
TRADD-201ENST00000345057 CCDC15Q0P6D6 951 aa25.3■■□□□ 1.64
TRADD-201ENST00000345057 SETDB1Q15047 1291 aa25.3■■□□□ 1.64
TRADD-201ENST00000345057 DUSP6Q16828 381 aa25.3■■□□□ 1.64
TRADD-201ENST00000345057 MBLAC2Q68D91 279 aa25.3■■□□□ 1.64
TRADD-201ENST00000345057 TBC1D1Q86TI0 1168 aaPredicted RBP25.3■■□□□ 1.64
TRADD-201ENST00000345057 CRLF3Q8IUI8 442 aa25.3■■□□□ 1.64
TRADD-201ENST00000345057 PLD6Q8N2A8 252 aaKnown RBP25.3■■□□□ 1.64
TRADD-201ENST00000345057 OR2AP1Q8NGE2 309 aa25.3■■□□□ 1.64
TRADD-201ENST00000345057 CDCA3Q99618 268 aaPredicted RBP25.3■■□□□ 1.64
TRADD-201ENST00000345057 NPHS2Q9NP85 383 aa25.3■■□□□ 1.64
TRADD-201ENST00000345057 YBX2Q9Y2T7 364 aaKnown RBP25.3■■□□□ 1.64
TRADD-201ENST00000345057 GBF1Q92538 1859 aa25.3■■□□□ 1.64
TRADD-201ENST00000345057 PHGDHO43175 533 aaKnown RBP25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms