RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 C17orf53Q8N3J3 647 aaPredicted RBP11.91□□□□□ -0.5
SNCA-202ENST00000345009 DEFB119Q8N690 84 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 ATL2Q8NHH9 583 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 RMDN1Q96DB5 314 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 MS4A14Q96JA4 679 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 RBM15Q96T37 977 aaKnown RBP eCLIP11.91□□□□□ -0.5
SNCA-202ENST00000345009 FSD1LQ9BXM9 530 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 TDRD1Q9BXT4 1180 aaKnown RBP11.91□□□□□ -0.5
SNCA-202ENST00000345009 GBA3Q9H227 469 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 C6orf106Q9H6K1 298 aaPredicted RBP11.91□□□□□ -0.5
SNCA-202ENST00000345009 C10orf88Q9H8K7 445 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 PCDH12Q9NPG4 1184 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 CD93Q9NPY3 652 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 KCTD5Q9NXV2 234 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.91□□□□□ -0.5
SNCA-202ENST00000345009 FRYLO94915 3013 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 FANCMQ8IYD8 2048 aa11.91□□□□□ -0.5
SNCA-202ENST00000345009 THADAQ6YHU6 1953 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 A0A1W2PQU0 124 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 LRP3O75074 770 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 PMPCBO75439 489 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 GJB3O75712 270 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 NFKB1P19838 968 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 PTGER3P43115 390 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 GRIA4P48058 902 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 TAS2R38P59533 333 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 SKOR1P84550 965 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 CDK18Q07002 472 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 ARHGEF7Q14155 803 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 SYT10Q6XYQ8 523 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 ARMCX6Q7L4S7 300 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 SUMF1Q8NBK3 374 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 KNL1Q8NG31 2342 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 CCDC110Q8TBZ0 833 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 GRK7Q8WTQ7 553 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 DNASE2BQ8WZ79 361 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 RUBCNQ92622 972 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 PIGKQ92643 395 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 BIRC7Q96CA5 298 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 RTP4Q96DX8 246 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 SCRN2Q96FV2 425 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 C16orf45Q96MC5 204 aaPredicted RBP11.9□□□□□ -0.5
SNCA-202ENST00000345009 RUNDC3BQ96NL0 473 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 HINFPQ9BQA5 517 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 AP1M1Q9BXS5 423 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 MIR1-1HGQ9H1L0 117 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 PAK5Q9P286 719 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 CHKBQ9Y259 395 aa11.9□□□□□ -0.5
SNCA-202ENST00000345009 FAM186AA6NE01 2351 aa11.9□□□□□ -0.51
SNCA-202ENST00000345009 PLXND1Q9Y4D7 1925 aa11.9□□□□□ -0.51
SNCA-202ENST00000345009 A0A1W2PPC4 97 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 ERI2A8K979 691 aaKnown RBP11.89□□□□□ -0.51
SNCA-202ENST00000345009 ANKRD66B4E2M5 251 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 E7EVH7 732 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 LATO43561 262 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 LZTS3O60299 673 aaPredicted RBP11.89□□□□□ -0.51
SNCA-202ENST00000345009 MAGEC1O60732 1142 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 TM7SF2O76062 418 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 EPN2O95208 641 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 NDST3O95803 873 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 GAS8O95995 478 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 MMP2P08253 660 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 ELFN1P0C7U0 828 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 ITPKAP23677 461 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 AKT2P31751 481 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 CD68P34810 354 aaPredicted RBP11.89□□□□□ -0.51
SNCA-202ENST00000345009 FDFT1P37268 417 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 LMAN1P49257 510 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 FNTAP49354 379 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 AFF3P51826 1226 aaKnown RBP11.89□□□□□ -0.51
SNCA-202ENST00000345009 WNT3AP56704 352 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 STAT4Q14765 748 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 SIX1Q15475 284 aaPredicted RBP11.89□□□□□ -0.51
SNCA-202ENST00000345009 TEAD4Q15561 434 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 PCSK7Q16549 785 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 DUOXA1Q1HG43 343 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 TMEM52BQ4KMG9 183 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 DPPA4Q7L190 304 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 GPR161Q8N6U8 529 aaKnown RBP11.89□□□□□ -0.51
SNCA-202ENST00000345009 PRELID2Q8N945 189 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 C12orf50Q8NA57 414 aaPredicted RBP11.89□□□□□ -0.51
SNCA-202ENST00000345009 LPCAT1Q8NF37 534 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 SPATA22Q8NHS9 363 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 FAM174AQ8TBP5 190 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 CCHCR1Q8TD31 782 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 PIH1D2Q8WWB5 315 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 ASB12Q8WXK4 309 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 VOPP1Q96AW1 172 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 CAPZA3Q96KX2 299 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 MLPHQ9BV36 600 aaPredicted RBP11.89□□□□□ -0.51
SNCA-202ENST00000345009 SLC17A9Q9BYT1 436 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 UBP1Q9NZI7 540 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 EIF2B4Q9UI10 523 aaKnown RBP11.89□□□□□ -0.51
SNCA-202ENST00000345009 PILRBQ9UKJ0 227 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 PPIL1Q9Y3C6 166 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 TRPM6Q9BX84 2022 aa11.89□□□□□ -0.51
SNCA-202ENST00000345009 OTOGLQ3ZCN5 2332 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 A0A0J9YYE9 177 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 A0A1B0GTW7 788 aa11.88□□□□□ -0.51
SNCA-202ENST00000345009 IGLON5A6NGN9 336 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms