RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ZNF600Q6ZNG1 722 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 SCGB3A2Q96PL1 93 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 TIMM29Q9BSF4 260 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 FUZQ9BT04 418 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 PITHD1Q9GZP4 211 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 FAM49BQ9NUQ9 324 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 C10orf71Q711Q0 1435 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 SLC9A3R1O14745 358 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 RP2O75695 350 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 SERPINA1P01009 418 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 MTHFSP49914 203 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 ZNF177Q13360 481 aaPredicted RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 STARD3Q14849 445 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 NAB2Q15742 525 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 VARS2Q5ST30 1063 aaKnown RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 PQLC1Q8N2U9 271 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 RIT2Q99578 217 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 CHRDQ9H2X0 955 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 UBQLN1Q9UMX0 589 aaKnown RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 PCDHGB6Q9Y5F9 930 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 STX16O14662 325 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 CSF2P04141 144 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 UMPSP11172 480 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 PITPNAQ00169 270 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 SLC18A3Q16572 532 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 TSPAN33Q86UF1 283 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 GAD1Q99259 594 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 EYA3Q99504 573 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 H0YAE9 185 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 RFX3P48380 749 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 CHRNA6Q15825 494 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 TRIM61Q5EBN2 209 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 AKR1C8PQ5T2L2 129 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 TMC2Q8TDI7 906 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 CLPTM1LQ96KA5 538 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 PTCHD1Q96NR3 888 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 RNF157Q96PX1 679 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 HEPHQ9BQS7 1158 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 NT5MQ9NPB1 228 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 EIF3LQ9Y262 564 aaKnown RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 MATKP42679 507 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 SLC15A1P46059 708 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 POLR2GP62487 172 aaKnown RBP eCLIP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 RNF4P78317 190 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 PPARAQ07869 468 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 CCNG2Q16589 344 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 ESRP1Q6NXG1 681 aaKnown RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 FBXO11Q86XK2 927 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 PAPD5Q8NDF8 572 aaKnown RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 HERVK_113Q902F9 699 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 ARMC7Q9H6L4 198 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 KCNU1A8MYU2 1149 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 AKAP3O75969 853 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 LAG3P18627 525 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 CALCRP30988 508 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 AP3M2P53677 418 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 GAD2Q05329 585 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 RBL2Q08999 1139 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 FADDQ13158 208 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 BAK1Q16611 211 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 PYDC2Q56P42 97 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 ATAD3CQ5T2N8 411 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 IZUMO3Q5VZ72 239 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 LRRC69Q6ZNQ3 347 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 CDK20Q8IZL9 346 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 EFHBQ8N7U6 833 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 TSPEARQ8WU66 669 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 TRIT1Q9H3H1 467 aaKnown RBP3.78□□□□□ -1.8
SYNE2-202ENST00000344113 ADAM28Q9UKQ2 775 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 SSR3Q9UNL2 185 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 ARHGAP23Q9P227 1491 aa3.78□□□□□ -1.8
SYNE2-202ENST00000344113 SPTBP11277 2137 aa3.78□□□□□ -1.81
SYNE2-202ENST00000344113 PHYHO14832 338 aa3.78□□□□□ -1.81
SYNE2-202ENST00000344113 OR2B6P58173 313 aa3.78□□□□□ -1.81
SYNE2-202ENST00000344113 YIF1BQ5BJH7 314 aa3.78□□□□□ -1.81
SYNE2-202ENST00000344113 IGFN1Q86VF2 1251 aa3.78□□□□□ -1.81
SYNE2-202ENST00000344113 NT5DC4Q86YG4 428 aa3.78□□□□□ -1.81
SYNE2-202ENST00000344113 PHC2Q8IXK0 858 aa3.78□□□□□ -1.81
SYNE2-202ENST00000344113 DENND1AQ8TEH3 1009 aa3.78□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF251Q9BRH9 671 aa3.78□□□□□ -1.81
SYNE2-202ENST00000344113 TRABDQ9H4I3 376 aa3.78□□□□□ -1.81
SYNE2-202ENST00000344113 SDHAF3Q9NRP4 125 aa3.78□□□□□ -1.81
SYNE2-202ENST00000344113 A0A087X0B3 334 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 IL7P13232 177 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 ADCY7P51828 1080 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 PLD1Q13393 1074 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CLEC16AQ2KHT3 1053 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 DPY19L3Q6ZPD9 716 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 BCL7CQ8WUZ0 217 aaPredicted RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CCM2Q9BSQ5 444 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 COPS4Q9BT78 406 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 MKNK1Q9BUB5 465 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 PAPOLGQ9BWT3 736 aaKnown RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 TWSG1Q9GZX9 223 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 TUT1Q9H6E5 874 aaKnown RBP3.77□□□□□ -1.81
SYNE2-202ENST00000344113 PRDM8Q9NQV8 689 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 XPNPEP1Q9NQW7 623 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 TBC1D24Q9ULP9 559 aa3.77□□□□□ -1.81
SYNE2-202ENST00000344113 CYP3A7-CYP3A51PA0A087WV96 503 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms