RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 MFSD14AQ96MC6 490 aa15.06■□□□□ 0
UBE3B-202ENST00000342494 TCF25Q9BQ70 676 aa15.06■□□□□ 0
UBE3B-202ENST00000342494 CNPPD1Q9BV87 410 aa15.06■□□□□ 0
UBE3B-202ENST00000342494 hCG_1818297A0A087WSY0 165 aa15.06■□□□□ 0
UBE3B-202ENST00000342494 MDM4O15151 490 aa15.06■□□□□ 0
UBE3B-202ENST00000342494 PRNPP04156 253 aa15.06■□□□□ 0
UBE3B-202ENST00000342494 GSTM5P46439 218 aa15.06■□□□□ 0
UBE3B-202ENST00000342494 IDH2P48735 452 aaKnown RBP15.06■□□□□ 0
UBE3B-202ENST00000342494 PKNOX1P55347 436 aa15.06■□□□□ 0
UBE3B-202ENST00000342494 SF1Q15637 639 aaKnown RBP15.06■□□□□ 0
UBE3B-202ENST00000342494 LSM12Q3MHD2 195 aaKnown RBP15.06■□□□□ 0
UBE3B-202ENST00000342494 ZNF549Q6P9A3 640 aa15.06■□□□□ 0
UBE3B-202ENST00000342494 SCIMPQ6UWF3 145 aa15.06■□□□□ 0
UBE3B-202ENST00000342494 DHRSXQ8N5I4 330 aa15.06■□□□□ 0
UBE3B-202ENST00000342494 RACGAP1Q9H0H5 632 aa15.06■□□□□ 0
UBE3B-202ENST00000342494 DUS2Q9NX74 493 aaKnown RBP15.06■□□□□ 0
UBE3B-202ENST00000342494 COPG2Q9UBF2 871 aa15.06■□□□□ 0
UBE3B-202ENST00000342494 LEF1Q9UJU2 399 aaPredicted RBP15.06■□□□□ 0
UBE3B-202ENST00000342494 RIPK3Q9Y572 518 aa15.06■□□□□ 0
UBE3B-202ENST00000342494 KIDINS220Q9ULH0 1771 aa15.06■□□□□ 0
UBE3B-202ENST00000342494 PROCP04070 461 aa15.06■□□□□ 0
UBE3B-202ENST00000342494 TSPAN8P19075 237 aa15.06■□□□□ 0
UBE3B-202ENST00000342494 TBX2Q13207 712 aaPredicted RBP15.06■□□□□ 0
UBE3B-202ENST00000342494 PLEKHA7Q6IQ23 1121 aa15.06■□□□□ 0
UBE3B-202ENST00000342494 UBE2R2Q712K3 238 aaPredicted RBP15.06■□□□□ 0
UBE3B-202ENST00000342494 CLP1Q92989 425 aaKnown RBP15.06■□□□□ 0
UBE3B-202ENST00000342494 OLFM1Q99784 485 aa15.06■□□□□ 0
UBE3B-202ENST00000342494 KCNK4Q9NYG8 393 aa15.06■□□□□ 0
UBE3B-202ENST00000342494 VAV3Q9UKW4 847 aa15.06■□□□□ 0
UBE3B-202ENST00000342494 PCDHA2Q9Y5H9 948 aa15.06■□□□□ 0
UBE3B-202ENST00000342494 AP3D1O14617 1153 aa15.05■□□□□ 0
UBE3B-202ENST00000342494 STBD1O95210 358 aa15.05■□□□□ 0
UBE3B-202ENST00000342494 SSR2P43308 183 aa15.05■□□□□ 0
UBE3B-202ENST00000342494 CDC42P60953 191 aa15.05■□□□□ 0
UBE3B-202ENST00000342494 SRSF11Q05519 484 aaKnown RBP15.05■□□□□ 0
UBE3B-202ENST00000342494 PARP15Q460N3 678 aa15.05■□□□□ 0
UBE3B-202ENST00000342494 ZNF57Q68EA5 555 aaPredicted RBP15.05■□□□□ 0
UBE3B-202ENST00000342494 ZNF398Q8TD17 642 aa15.05■□□□□ 0
UBE3B-202ENST00000342494 MAML3Q96JK9 1138 aa15.05■□□□□ 0
UBE3B-202ENST00000342494 SH3GL3Q99963 347 aa15.05■□□□□ 0
UBE3B-202ENST00000342494 B4GALT4O60513 344 aa15.05■□□□□ -0
UBE3B-202ENST00000342494 CDK14O94921 469 aa15.05■□□□□ -0
UBE3B-202ENST00000342494 ITPKBP27987 946 aa15.05■□□□□ -0
UBE3B-202ENST00000342494 SLC5A3P53794 718 aa15.05■□□□□ -0
UBE3B-202ENST00000342494 NEK5Q6P3R8 708 aa15.05■□□□□ -0
UBE3B-202ENST00000342494 GPR180Q86V85 440 aa15.05■□□□□ -0
UBE3B-202ENST00000342494 PIWIL2Q8TC59 973 aaKnown RBP15.05■□□□□ -0
UBE3B-202ENST00000342494 MARK4Q96L34 752 aa15.05■□□□□ -0
UBE3B-202ENST00000342494 FUCA2Q9BTY2 467 aa15.05■□□□□ -0
UBE3B-202ENST00000342494 GDF3Q9NR23 364 aa15.05■□□□□ -0
UBE3B-202ENST00000342494 ERVW-1Q9UQF0 538 aa15.05■□□□□ -0
UBE3B-202ENST00000342494 TBC1D30Q9Y2I9 924 aa15.05■□□□□ -0
UBE3B-202ENST00000342494 DEPDC5O75140 1603 aa15.05■□□□□ -0
UBE3B-202ENST00000342494 PTPN2P17706 415 aa15.05■□□□□ -0
UBE3B-202ENST00000342494 CAPN13Q6MZZ7 669 aaPredicted RBP15.05■□□□□ -0
UBE3B-202ENST00000342494 NETO2Q8NC67 525 aa15.05■□□□□ -0
UBE3B-202ENST00000342494 NLGN2Q8NFZ4 835 aa15.05■□□□□ -0
UBE3B-202ENST00000342494 EBNA1BP2Q99848 306 aaKnown RBP15.05■□□□□ -0
UBE3B-202ENST00000342494 C6orf62Q9GZU0 229 aaPredicted RBP15.05■□□□□ -0
UBE3B-202ENST00000342494 MCIDASD6RGH6 385 aa15.05■□□□□ -0
UBE3B-202ENST00000342494 LGR5O75473 907 aa15.05■□□□□ -0
UBE3B-202ENST00000342494 BMP7P18075 431 aa15.05■□□□□ -0
UBE3B-202ENST00000342494 SMIM11AP58511 58 aa15.05■□□□□ -0
UBE3B-202ENST00000342494 BNC1Q01954 994 aa15.05■□□□□ -0
UBE3B-202ENST00000342494 SQLEQ14534 574 aa15.05■□□□□ -0
UBE3B-202ENST00000342494 INTS6LQ5JSJ4 861 aaKnown RBP15.05■□□□□ -0
UBE3B-202ENST00000342494 STRADAQ7RTN6 431 aa15.05■□□□□ -0
UBE3B-202ENST00000342494 PGM2Q96G03 612 aa15.05■□□□□ -0
UBE3B-202ENST00000342494 SH3GL2Q99962 352 aa15.05■□□□□ -0
UBE3B-202ENST00000342494 AGO3Q9H9G7 860 aaKnown RBP15.05■□□□□ -0
UBE3B-202ENST00000342494 EVLQ9UI08 416 aaPredicted RBP15.05■□□□□ -0
UBE3B-202ENST00000342494 MRTO4Q9UKD2 239 aaKnown RBP15.05■□□□□ -0
UBE3B-202ENST00000342494 TRBV23OR9-2A0A075B6M9 112 aa15.04■□□□□ -0
UBE3B-202ENST00000342494 GLYATL1P3A0A0U1RQE8 302 aa15.04■□□□□ -0
UBE3B-202ENST00000342494 RASGRP1O95267 797 aa15.04■□□□□ -0
UBE3B-202ENST00000342494 HNRNPH1P31943 449 aaKnown RBP15.04■□□□□ -0
UBE3B-202ENST00000342494 TSHZ1Q6ZSZ6 1077 aa15.04■□□□□ -0
UBE3B-202ENST00000342494 B3GNT5Q9BYG0 378 aa15.04■□□□□ -0
UBE3B-202ENST00000342494 LRRC72A6NJI9 287 aa15.04■□□□□ -0
UBE3B-202ENST00000342494 MGRN1O60291 552 aa15.04■□□□□ -0
UBE3B-202ENST00000342494 ATG13O75143 517 aa15.04■□□□□ -0
UBE3B-202ENST00000342494 CCNYL3P0C7X3 344 aa15.04■□□□□ -0
UBE3B-202ENST00000342494 HGFP14210 728 aa15.04■□□□□ -0
UBE3B-202ENST00000342494 ITGA2P17301 1181 aa15.04■□□□□ -0
UBE3B-202ENST00000342494 PPP2R2DQ66LE6 453 aa15.04■□□□□ -0
UBE3B-202ENST00000342494 PIWIL4Q7Z3Z4 852 aaKnown RBP15.04■□□□□ -0
UBE3B-202ENST00000342494 NRSN1Q8IZ57 195 aa15.04■□□□□ -0
UBE3B-202ENST00000342494 HERVK_113Q902F9 699 aa15.04■□□□□ -0
UBE3B-202ENST00000342494 PAPSS1O43252 624 aaPredicted RBP15.04■□□□□ -0
UBE3B-202ENST00000342494 ITGAXP20702 1163 aa15.04■□□□□ -0
UBE3B-202ENST00000342494 FAM171BQ6P995 826 aa15.04■□□□□ -0
UBE3B-202ENST00000342494 PANX1Q96RD7 426 aa15.04■□□□□ -0
UBE3B-202ENST00000342494 GLOD4Q9HC38 313 aa15.04■□□□□ -0
UBE3B-202ENST00000342494 H3BM21 787 aa15.04■□□□□ -0
UBE3B-202ENST00000342494 PRG2P13727 222 aa15.04■□□□□ -0
UBE3B-202ENST00000342494 MIIPQ5JXC2 388 aa15.04■□□□□ -0
UBE3B-202ENST00000342494 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.04■□□□□ -0
UBE3B-202ENST00000342494 TAF8Q7Z7C8 310 aa15.04■□□□□ -0
UBE3B-202ENST00000342494 OFCC1Q8IZS5 231 aa15.04■□□□□ -0
UBE3B-202ENST00000342494 SPATA6LQ8N4H0 392 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms