RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 VIPAS39Q9H9C1 493 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 IL36AQ9UHA7 158 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 CKAP5Q14008 2032 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 KPNA3O00505 521 aaPredicted RBP13.94□□□□□ -0.18
PMS1-201ENST00000342075 POLBP06746 335 aa13.94□□□□□ -0.18
PMS1-201ENST00000342075 EIF2DP41214 584 aaKnown RBP13.94□□□□□ -0.18
PMS1-201ENST00000342075 STEAP4Q687X5 459 aa13.94□□□□□ -0.18
PMS1-201ENST00000342075 GDPD4Q6W3E5 623 aa13.94□□□□□ -0.18
PMS1-201ENST00000342075 FAM129BQ96TA1 746 aa13.94□□□□□ -0.18
PMS1-201ENST00000342075 ACSS3Q9H6R3 686 aa13.94□□□□□ -0.18
PMS1-201ENST00000342075 PRSS16Q9NQE7 514 aa13.94□□□□□ -0.18
PMS1-201ENST00000342075 FRYLO94915 3013 aa13.94□□□□□ -0.18
PMS1-201ENST00000342075 CLDN7O95471 211 aa13.94□□□□□ -0.18
PMS1-201ENST00000342075 ZP2Q05996 745 aa13.94□□□□□ -0.18
PMS1-201ENST00000342075 TDGQ13569 410 aa13.94□□□□□ -0.18
PMS1-201ENST00000342075 ALS2CLQ60I27 953 aa13.94□□□□□ -0.18
PMS1-201ENST00000342075 Q6ZS52 159 aa13.94□□□□□ -0.18
PMS1-201ENST00000342075 DENND6AQ8IWF6 608 aa13.94□□□□□ -0.18
PMS1-201ENST00000342075 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.94□□□□□ -0.18
PMS1-201ENST00000342075 PPP1R2P1Q96PQ5 205 aa13.94□□□□□ -0.18
PMS1-201ENST00000342075 PAFAH2Q99487 392 aa13.94□□□□□ -0.18
PMS1-201ENST00000342075 TREX1Q9NSU2 369 aa13.94□□□□□ -0.18
PMS1-201ENST00000342075 C20orf96Q9NUD7 363 aaPredicted RBP13.94□□□□□ -0.18
PMS1-201ENST00000342075 HAUS2Q9NVX0 235 aa13.94□□□□□ -0.18
PMS1-201ENST00000342075 MOCS1Q9NZB8 636 aa13.94□□□□□ -0.18
PMS1-201ENST00000342075 MTF2Q9Y483 593 aaPredicted RBP13.94□□□□□ -0.18
PMS1-201ENST00000342075 FAM237BA0A1B0GVD1 139 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.93□□□□□ -0.18
PMS1-201ENST00000342075 ADAM23O75077 832 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 IL1BP01584 269 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 EPOP01588 193 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 LHCGRP22888 699 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 GMPRP36959 345 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 CSNK1DP48730 415 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 SLC44A4Q53GD3 710 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 TMEM196Q5HYL7 178 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 OR4K2Q8NGD2 314 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 ECHDC3Q96DC8 303 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 CERS2Q96G23 380 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 TBATAQ96M53 351 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 ADGRE3Q9BY15 652 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 SCN8AQ9UQD0 1980 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 A0A0J9YYE9 177 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 MROH6A6NGR9 719 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 RASGRF2O14827 1237 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 RNF40O75150 1001 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 USP1O94782 785 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 TRBC1P01850 177 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 ABHD2P08910 425 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 CREB1P16220 341 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 COL9A1P20849 921 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 ADRA1DP25100 572 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 CDKN1CP49918 316 aaPredicted RBP13.93□□□□□ -0.18
PMS1-201ENST00000342075 BMPR2Q13873 1038 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 TMED2Q15363 201 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 TSTD2Q5T7W7 516 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 PARS2Q7L3T8 475 aaKnown RBP13.93□□□□□ -0.18
PMS1-201ENST00000342075 PTAR1Q7Z6K3 402 aaPredicted RBP13.93□□□□□ -0.18
PMS1-201ENST00000342075 METTL3Q86U44 580 aaKnown RBP13.93□□□□□ -0.18
PMS1-201ENST00000342075 RASSF3Q86WH2 238 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 IL17RCQ8NAC3 791 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 TXNDC5Q8NBS9 432 aaKnown RBP13.93□□□□□ -0.18
PMS1-201ENST00000342075 CD93Q9NPY3 652 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 IARS2Q9NSE4 1012 aaKnown RBP13.93□□□□□ -0.18
PMS1-201ENST00000342075 C2orf42Q9NWW7 574 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 LRRK1Q38SD2 2015 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 C1orf232A0A0U1RR37 186 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 SRFP11831 508 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 HNRNPLP14866 589 aaKnown RBP eCLIP13.93□□□□□ -0.183e-6■■■□□ 15.5
PMS1-201ENST00000342075 CES1P23141 567 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 CA5AP35218 305 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 ARCN1P48444 511 aaKnown RBP13.93□□□□□ -0.18
PMS1-201ENST00000342075 PSMD8P48556 350 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 GYS2P54840 703 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 CBLBQ13191 982 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 CTBP1Q13363 440 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 KCNMB4Q86W47 210 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 FLCNQ8NFG4 579 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 HDAC10Q969S8 669 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 ARRDC3Q96B67 414 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 MARCH4Q9P2E8 410 aaPredicted RBP13.93□□□□□ -0.18
PMS1-201ENST00000342075 FAM169AQ9Y6X4 670 aa13.93□□□□□ -0.18
PMS1-201ENST00000342075 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.92□□□□□ -0.18
PMS1-201ENST00000342075 HEATR9A2RTY3 570 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 KLF8O95600 359 aaPredicted RBP13.92□□□□□ -0.18
PMS1-201ENST00000342075 PHBP35232 272 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 ZNF789Q5FWF6 425 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 SPDYCQ5MJ68 293 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 CEP128Q6ZU80 1094 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 RALGPS2Q86X27 583 aaPredicted RBP13.92□□□□□ -0.18
PMS1-201ENST00000342075 ACVR1CQ8NER5 493 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 PIP4K2CQ8TBX8 421 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 BRSK1Q8TDC3 778 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 DCAKDQ8WVC6 231 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 UCMAQ8WVF2 138 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 CCDC97Q96F63 343 aaPredicted RBP13.92□□□□□ -0.18
PMS1-201ENST00000342075 NECAB3Q96P71 396 aaPredicted RBP13.92□□□□□ -0.18
PMS1-201ENST00000342075 SH3GL2Q99962 352 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 CPEB1Q9BZB8 566 aaKnown RBP13.92□□□□□ -0.18
PMS1-201ENST00000342075 MKRN2Q9H000 416 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms