RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 SERINC3Q13530 473 aa10.39□□□□□ -0.75
LIMA1-201ENST00000341247 SEMA3AQ14563 771 aa10.39□□□□□ -0.75
LIMA1-201ENST00000341247 LINGO4Q6UY18 593 aa10.39□□□□□ -0.75
LIMA1-201ENST00000341247 PCDH20Q8N6Y1 951 aaKnown RBP10.39□□□□□ -0.75
LIMA1-201ENST00000341247 RDH11Q8TC12 318 aa10.39□□□□□ -0.75
LIMA1-201ENST00000341247 CASD1Q96PB1 797 aa10.39□□□□□ -0.75
LIMA1-201ENST00000341247 S100A14Q9HCY8 104 aa10.39□□□□□ -0.75
LIMA1-201ENST00000341247 GIMAP2Q9UG22 337 aa10.39□□□□□ -0.75
LIMA1-201ENST00000341247 PTGDR2Q9Y5Y4 395 aa10.39□□□□□ -0.75
LIMA1-201ENST00000341247 CCDC162PA2VCL2 907 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 C9JVG2 144 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 CBX4O00257 560 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 LDB2O43679 373 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 H2AFYO75367 372 aaKnown RBP10.38□□□□□ -0.75
LIMA1-201ENST00000341247 LUC7L3O95232 432 aaKnown RBP10.38□□□□□ -0.75
LIMA1-201ENST00000341247 ATXN1LP0C7T5 689 aaKnown RBP10.38□□□□□ -0.75
LIMA1-201ENST00000341247 RAG1P15918 1043 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 ACADSP16219 412 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 HTR7P34969 479 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 CSRP3P50461 194 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 SGSHP51688 502 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 FAM189BP81408 668 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 ART3Q13508 389 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 BLMHQ13867 455 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 AGAP9Q5VTM2 703 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 DSELQ8IZU8 1212 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 FBXW8Q8N3Y1 598 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 EFHBQ8N7U6 833 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 CALML6Q8TD86 181 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 ACTRT2Q8TDY3 377 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 ZNF184Q99676 751 aaPredicted RBP10.38□□□□□ -0.75
LIMA1-201ENST00000341247 POLR1EQ9GZS1 481 aaKnown RBP10.38□□□□□ -0.75
LIMA1-201ENST00000341247 YY1AP1Q9H869 796 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 BPIFA1Q9NP55 256 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 CLIC5Q9NZA1 410 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 COPG1Q9Y678 874 aaKnown RBP10.38□□□□□ -0.75
LIMA1-201ENST00000341247 DPPA5A6NC42 116 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 GOLGA8CPA6NN73 597 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 S1PR4O95977 384 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 PPARGP37231 505 aaPredicted RBP10.38□□□□□ -0.75
LIMA1-201ENST00000341247 C1QTNF8P60827 252 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 SULT2A1Q06520 285 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 KLC1Q07866 573 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 TECRLQ5HYJ1 363 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 KLC3Q6P597 504 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 KLHDC8BQ8IXV7 354 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 PTCD2Q8WV60 388 aaKnown RBP10.38□□□□□ -0.75
LIMA1-201ENST00000341247 CCDC167Q9P0B6 97 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 ADAMTS6Q9UKP5 1117 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 CASP8AP2Q9UKL3 1982 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 A0A087X1B8 175 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 RGSL1A5PLK6 1076 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 NCF1BA6NI72 391 aaPredicted RBP10.38□□□□□ -0.75
LIMA1-201ENST00000341247 SLC38A8A6NNN8 435 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 NCF1CA8MVU1 366 aaPredicted RBP10.38□□□□□ -0.75
LIMA1-201ENST00000341247 WASH4PA8MWX3 477 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 IPO13O94829 963 aaKnown RBP10.38□□□□□ -0.75
LIMA1-201ENST00000341247 THRAP10827 490 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 NCF1P14598 390 aaPredicted RBP10.38□□□□□ -0.75
LIMA1-201ENST00000341247 SELPP16109 830 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 PEX2P28328 305 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 THOP1P52888 689 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 TRIP10Q15642 601 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 ZRSR2Q15696 482 aaKnown RBP10.38□□□□□ -0.75
LIMA1-201ENST00000341247 CUZD1Q86UP6 607 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 SLC45A3Q96JT2 553 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 NSMCE3Q96MG7 304 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 FBRSL1Q9HCM7 1045 aaKnown RBP10.38□□□□□ -0.75
LIMA1-201ENST00000341247 VPS45Q9NRW7 570 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 PCDHGC4Q9Y5F7 938 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 AK5Q9Y6K8 562 aa10.38□□□□□ -0.75
LIMA1-201ENST00000341247 EME2A4GXA9 379 aaPredicted RBP10.37□□□□□ -0.75
LIMA1-201ENST00000341247 TXNDC9O14530 226 aa10.37□□□□□ -0.75
LIMA1-201ENST00000341247 KIF3CO14782 793 aa10.37□□□□□ -0.75
LIMA1-201ENST00000341247 GPR39O43194 453 aa10.37□□□□□ -0.75
LIMA1-201ENST00000341247 RTN3O95197 1032 aaPredicted RBP10.37□□□□□ -0.75
LIMA1-201ENST00000341247 GLP2RO95838 553 aa10.37□□□□□ -0.75
LIMA1-201ENST00000341247 GALTP07902 379 aa10.37□□□□□ -0.75
LIMA1-201ENST00000341247 COL6A2P12110 1019 aa10.37□□□□□ -0.75
LIMA1-201ENST00000341247 XRCC1P18887 633 aaPredicted RBP10.37□□□□□ -0.75
LIMA1-201ENST00000341247 PEX19P40855 299 aa10.37□□□□□ -0.75
LIMA1-201ENST00000341247 LEPRP48357 1165 aaKnown RBP10.37□□□□□ -0.75
LIMA1-201ENST00000341247 CDKN1CP49918 316 aaPredicted RBP10.37□□□□□ -0.75
LIMA1-201ENST00000341247 MRPS22P82650 360 aaKnown RBP10.37□□□□□ -0.75
LIMA1-201ENST00000341247 BTKQ06187 659 aa10.37□□□□□ -0.75
LIMA1-201ENST00000341247 GPR17Q13304 367 aa10.37□□□□□ -0.75
LIMA1-201ENST00000341247 MSLNQ13421 630 aaPredicted RBP10.37□□□□□ -0.75
LIMA1-201ENST00000341247 GRAMD1BQ3KR37 738 aa10.37□□□□□ -0.75
LIMA1-201ENST00000341247 CAPRIN2Q6IMN6 1127 aaKnown RBP10.37□□□□□ -0.75
LIMA1-201ENST00000341247 KIAA1841Q6NSI8 718 aa10.37□□□□□ -0.75
LIMA1-201ENST00000341247 LRRC49Q8IUZ0 686 aa10.37□□□□□ -0.75
LIMA1-201ENST00000341247 KYQ8NBH2 561 aa10.37□□□□□ -0.75
LIMA1-201ENST00000341247 OR9I1Q8NGQ6 314 aa10.37□□□□□ -0.75
LIMA1-201ENST00000341247 WBP2Q969T9 261 aa10.37□□□□□ -0.75
LIMA1-201ENST00000341247 PTERQ96BW5 349 aa10.37□□□□□ -0.75
LIMA1-201ENST00000341247 RTKNQ9BST9 563 aa10.37□□□□□ -0.75
LIMA1-201ENST00000341247 YIPF3Q9GZM5 350 aa10.37□□□□□ -0.75
LIMA1-201ENST00000341247 MIA3Q5JRA6 1907 aa10.37□□□□□ -0.75
LIMA1-201ENST00000341247 OR6C75A6NL08 312 aa10.37□□□□□ -0.75
LIMA1-201ENST00000341247 TMEM189-UBE2V1I3L0A0 370 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms