RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 LIG3P49916 1009 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 BLKP51451 505 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 HADHBP55084 474 aaKnown RBP13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 MMRN1Q13201 1228 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 MTM1Q13496 603 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 PROX2Q3B8N5 592 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 ODF2Q5BJF6 829 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 ALG1LQ6GMV1 187 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 ZSWIM9Q86XI8 627 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 TC2NQ8N9U0 490 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 FAM181AQ8N9Y4 354 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 MAML1Q92585 1016 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 CALR3Q96L12 384 aaKnown RBP13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 POLR1EQ9GZS1 481 aaKnown RBP13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 DDX56Q9NY93 547 aaKnown RBP13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 ANKRD36A6QL64 1941 aa13.41□□□□□ -0.26
SIRPB3P-201ENST00000340424 MAP1BP46821 2468 aaKnown RBP13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 C1QTNF9BB2RNN3 333 aa13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 SIGLEC6O43699 453 aa13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 LCA5LO95447 670 aa13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 CPP00450 1065 aa13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 C1QTNF9P0C862 333 aa13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 CYP2A6P11509 494 aaPredicted RBP13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 ZFXP17010 805 aaPredicted RBP13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 JUNDP17535 347 aa13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 ITIH2P19823 946 aa13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 CA4P22748 312 aa13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 DUSP3P51452 185 aaPredicted RBP13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 IRF4Q15306 451 aa13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 SPA17Q15506 151 aa13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 ATP13A4Q4VNC1 1196 aa13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 RHOT1Q8IXI2 618 aa13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 NDUFAF2Q8N183 169 aa13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 CACTIN-AS1Q8N1I8 211 aa13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 PGBD5Q8N414 524 aa13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 ZNF548Q8NEK5 533 aaPredicted RBP13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 HDAC11Q96DB2 347 aa13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 RNF157Q96PX1 679 aa13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 SLC13A1Q9BZW2 595 aa13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 NOD2Q9HC29 1040 aa13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 SPASTQ9UBP0 616 aa13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 PHTF1Q9UMS5 762 aa13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 AKAP13Q12802 2813 aa13.4□□□□□ -0.26
SIRPB3P-201ENST00000340424 KMT2BQ9UMN6 2715 aaPredicted RBP13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 LRRD1A4D1F6 860 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 PSMD11O00231 422 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 TRIM38O00635 465 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 TPP1O14773 563 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 AQP9O43315 295 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 NEBLO76041 1014 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 GP1BAP07359 652 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 HOXC4P09017 264 aaPredicted RBP13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 CKMT1AP12532 417 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 CYLC1P35663 651 aaPredicted RBP13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 MAGEA1P43355 309 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 E2F1Q01094 437 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 RALGDSQ12967 914 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 DNAJC3Q13217 504 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 WSCD2Q2TBF2 565 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 ARMC12Q5T9G4 340 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 ZCCHC8Q6NZY4 707 aaKnown RBP13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 DHRS13Q6UX07 377 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 LIPIQ6XZB0 460 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 USP45Q70EL2 814 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 SDR16C5Q8N3Y7 309 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 PQLC3Q8N755 202 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 ANP32BQ92688 251 aaKnown RBP13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 PANX2Q96RD6 677 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 MAK16Q9BXY0 300 aaKnown RBP13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 BRD8Q9H0E9 1235 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 NT5MQ9NPB1 228 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 MBNL1Q9NR56 388 aaKnown RBP13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 UCKL1Q9NWZ5 548 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 DTLQ9NZJ0 730 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 APOBEC3BQ9UH17 382 aaKnown RBP13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 SALL4Q9UJQ4 1053 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 DNPEPQ9ULA0 475 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 PCDHGC4Q9Y5F7 938 aa13.39□□□□□ -0.27
SIRPB3P-201ENST00000340424 PTPRBP23467 1997 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 USP24Q9UPU5 2620 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 A0A0A6YYK5 440 aaPredicted RBP13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 FFAR2O15552 330 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 PSTPIP1O43586 416 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 SPOPO43791 374 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 RECQL5O94762 991 aaPredicted RBP13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 PGLSO95336 258 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 IPO7O95373 1038 aaKnown RBP13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 GIMD1P0DJR0 217 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 CCNB1P14635 433 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 KELP23276 732 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 VIPR1P32241 457 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 ZNF75DP51815 510 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 MAXP61244 160 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 RPL26P61254 145 aaKnown RBP13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 DAB2P98082 770 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 PPARDQ03181 441 aa13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 PPIDQ08752 370 aaKnown RBP13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 EIF2B5Q13144 721 aaKnown RBP13.38□□□□□ -0.27
SIRPB3P-201ENST00000340424 INPP5AQ14642 412 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms