RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 C6P13671 934 aa15.33■□□□□ 0.04
UBE3B-201ENST00000340074 CTPS1P17812 591 aa15.33■□□□□ 0.04
UBE3B-201ENST00000340074 RBL1P28749 1068 aa15.33■□□□□ 0.04
UBE3B-201ENST00000340074 SKOR1P84550 965 aa15.33■□□□□ 0.04
UBE3B-201ENST00000340074 PTPRRQ15256 657 aa15.33■□□□□ 0.04
UBE3B-201ENST00000340074 HLA-BQ31612 363 aa15.33■□□□□ 0.04
UBE3B-201ENST00000340074 SEL1L2Q5TEA6 688 aa15.33■□□□□ 0.04
UBE3B-201ENST00000340074 GCNT7Q6ZNI0 430 aa15.33■□□□□ 0.04
UBE3B-201ENST00000340074 DPPA4Q7L190 304 aa15.33■□□□□ 0.04
UBE3B-201ENST00000340074 ASB12Q8WXK4 309 aa15.33■□□□□ 0.04
UBE3B-201ENST00000340074 SKA1Q96BD8 255 aa15.33■□□□□ 0.04
UBE3B-201ENST00000340074 IMP4Q96G21 291 aaKnown RBP15.33■□□□□ 0.04
UBE3B-201ENST00000340074 LENG8Q96PV6 779 aaPredicted RBP15.33■□□□□ 0.04
UBE3B-201ENST00000340074 SLC25A51Q9H1U9 297 aa15.33■□□□□ 0.04
UBE3B-201ENST00000340074 GAREM1Q9H706 876 aa15.33■□□□□ 0.04
UBE3B-201ENST00000340074 GLOD4Q9HC38 313 aa15.33■□□□□ 0.04
UBE3B-201ENST00000340074 B4GALT6Q9UBX8 382 aa15.33■□□□□ 0.04
UBE3B-201ENST00000340074 POM121BA6NF01 834 aa15.32■□□□□ 0.04
UBE3B-201ENST00000340074 KCNK3O14649 394 aa15.32■□□□□ 0.04
UBE3B-201ENST00000340074 SLC30A4O14863 429 aa15.32■□□□□ 0.04
UBE3B-201ENST00000340074 CA4P22748 312 aa15.32■□□□□ 0.04
UBE3B-201ENST00000340074 CD68P34810 354 aaPredicted RBP15.32■□□□□ 0.04
UBE3B-201ENST00000340074 CTSKP43235 329 aa15.32■□□□□ 0.04
UBE3B-201ENST00000340074 UAP1L1Q3KQV9 507 aa15.32■□□□□ 0.04
UBE3B-201ENST00000340074 DARS2Q6PI48 645 aaKnown RBP15.32■□□□□ 0.04
UBE3B-201ENST00000340074 IL27RAQ6UWB1 636 aa15.32■□□□□ 0.04
UBE3B-201ENST00000340074 LIPIQ6XZB0 460 aa15.32■□□□□ 0.04
UBE3B-201ENST00000340074 IQCHQ86VS3 1027 aa15.32■□□□□ 0.04
UBE3B-201ENST00000340074 ZNF567Q8N184 647 aa15.32■□□□□ 0.04
UBE3B-201ENST00000340074 SPATA22Q8NHS9 363 aa15.32■□□□□ 0.04
UBE3B-201ENST00000340074 KLHDC7BQ96G42 594 aa15.32■□□□□ 0.04
UBE3B-201ENST00000340074 BMFQ96LC9 184 aa15.32■□□□□ 0.04
UBE3B-201ENST00000340074 SMIM14Q96QK8 99 aa15.32■□□□□ 0.04
UBE3B-201ENST00000340074 TLR10Q9BXR5 811 aa15.32■□□□□ 0.04
UBE3B-201ENST00000340074 CARD9Q9H257 536 aa15.32■□□□□ 0.04
UBE3B-201ENST00000340074 IL21RQ9HBE5 538 aa15.32■□□□□ 0.04
UBE3B-201ENST00000340074 PCDH9Q9HC56 1237 aa15.32■□□□□ 0.04
UBE3B-201ENST00000340074 TRMT1Q9NXH9 659 aaKnown RBP15.32■□□□□ 0.04
UBE3B-201ENST00000340074 KLHL8Q9P2G9 620 aaPredicted RBP15.32■□□□□ 0.04
UBE3B-201ENST00000340074 NPIPB15A6NHN6 443 aaPredicted RBP15.31■□□□□ 0.04
UBE3B-201ENST00000340074 LZTS3O60299 673 aaPredicted RBP15.31■□□□□ 0.04
UBE3B-201ENST00000340074 CER1O95813 267 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 MT-CYBP00156 380 aaPredicted RBP15.31■□□□□ 0.04
UBE3B-201ENST00000340074 PRLP01236 227 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 ALPIP09923 528 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 ELFN1P0C7U0 828 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 NFKB1P19838 968 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 SDHBP21912 280 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 VIPR1P32241 457 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 EPHB1P54762 984 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 NXPH1P58417 271 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 CCDC173Q0VFZ6 552 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 OVGP1Q12889 678 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 KDM7AQ6ZMT4 941 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 USP45Q70EL2 814 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 PID1Q7Z2X4 250 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 ABI3BPQ7Z7G0 1075 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 CDKL3Q8IVW4 592 aaPredicted RBP15.31■□□□□ 0.04
UBE3B-201ENST00000340074 TTC13Q8NBP0 860 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 TP53I13Q8NBR0 393 aaPredicted RBP15.31■□□□□ 0.04
UBE3B-201ENST00000340074 DENND6BQ8NEG7 585 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 CENPTQ96BT3 561 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 SCRN2Q96FV2 425 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 MCCC1Q96RQ3 725 aaPredicted RBP15.31■□□□□ 0.04
UBE3B-201ENST00000340074 VAT1Q99536 393 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 FERMT1Q9BQL6 677 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 C1QTNF7Q9BXJ2 289 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 DNAAF2Q9NVR5 837 aaKnown RBP15.31■□□□□ 0.04
UBE3B-201ENST00000340074 DLL3Q9NYJ7 618 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 R3HDM2Q9Y2K5 976 aaKnown RBP15.31■□□□□ 0.04
UBE3B-201ENST00000340074 PPIL1Q9Y3C6 166 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 HS3ST3A1Q9Y663 406 aa15.31■□□□□ 0.04
UBE3B-201ENST00000340074 SCN8AQ9UQD0 1980 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 A0A0J9YYE9 177 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 A0A0U1RQS6 177 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 CFAP69A5D8W1 941 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 PCNX2A6NKB5 2137 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 GOLGA8CPA6NN73 597 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 A6NNZ2 444 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 F5H423 210 aaPredicted RBP15.3■□□□□ 0.04
UBE3B-201ENST00000340074 ENC1O14682 589 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 FPGTO14772 594 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 KCNN4O15554 427 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 MAGEC1O60732 1142 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 OPHN1O60890 802 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 TRBC1P01850 177 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 THEGLP0DJG4 465 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 CYP2A6P11509 494 aaPredicted RBP15.3■□□□□ 0.04
UBE3B-201ENST00000340074 NFKBIAP25963 317 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 HNF1BP35680 557 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 IGFALSP35858 605 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 CNGA3Q16281 694 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 PCSK7Q16549 785 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 PRAMEF14Q5SWL7 426 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 KDELC2Q7Z4H8 507 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 PTAR1Q7Z6K3 402 aaPredicted RBP15.3■□□□□ 0.04
UBE3B-201ENST00000340074 TSPAN33Q86UF1 283 aa15.3■□□□□ 0.04
UBE3B-201ENST00000340074 SPATS2Q86XZ4 545 aaKnown RBP15.3■□□□□ 0.04
UBE3B-201ENST00000340074 SLC13A5Q86YT5 568 aaPredicted RBP15.3■□□□□ 0.04
UBE3B-201ENST00000340074 NDUFAF2Q8N183 169 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms