RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 SENP8Q96LD8 212 aa8.73□□□□□ -1.01
RTN3-202ENST00000339997 ZNF570Q96NI8 536 aa8.73□□□□□ -1.01
RTN3-202ENST00000339997 AGAP2Q99490 1192 aa8.73□□□□□ -1.01
RTN3-202ENST00000339997 OSBPL11Q9BXB4 747 aa8.73□□□□□ -1.01
RTN3-202ENST00000339997 FANCEQ9HB96 536 aa8.73□□□□□ -1.01
RTN3-202ENST00000339997 TBC1D13Q9NVG8 400 aa8.73□□□□□ -1.01
RTN3-202ENST00000339997 ADPRHL2Q9NX46 363 aa8.73□□□□□ -1.01
RTN3-202ENST00000339997 PLK2Q9NYY3 685 aa8.73□□□□□ -1.01
RTN3-202ENST00000339997 MALT1Q9UDY8 824 aa8.73□□□□□ -1.01
RTN3-202ENST00000339997 POMPQ9Y244 141 aa8.73□□□□□ -1.01
RTN3-202ENST00000339997 SH3GLB1Q9Y371 365 aa8.73□□□□□ -1.01
RTN3-202ENST00000339997 TSPOAP1O95153 1857 aa8.73□□□□□ -1.01
RTN3-202ENST00000339997 LOC110117498-PIK3R3F6TDL0 507 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 NCAM2O15394 837 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 MSI1O43347 362 aaKnown RBP8.72□□□□□ -1.01
RTN3-202ENST00000339997 NOBOXO60393 691 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 KCNH1O95259 989 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 ANXA6P08133 673 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 HPGDP15428 266 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 GABRB2P47870 512 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 SCNN1GP51170 649 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 GTF2BQ00403 316 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 SNAPC2Q13487 334 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 GRIK4Q16099 956 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 PPM1LQ5SGD2 360 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 LIPMQ5VYY2 423 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 PAOXQ6QHF9 649 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 XKR5Q6UX68 686 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 PTF1AQ7RTS3 328 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 C12orf56Q8IXR9 622 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 GPR65Q8IYL9 337 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 CFAP52Q8N1V2 620 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 MSL3Q8N5Y2 521 aaKnown RBP8.72□□□□□ -1.01
RTN3-202ENST00000339997 STAG3L4Q8TBR4 150 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 TOP1MTQ969P6 601 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 TMEM159Q96B96 161 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 TBATAQ96M53 351 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 PANX1Q96RD7 426 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 CHCHD6Q9BRQ6 235 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 COQ10BQ9H8M1 238 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 MCUBQ9NWR8 336 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 SLC27A5Q9Y2P5 690 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 SNX10Q9Y5X0 201 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 H3BSA7 217 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 BTN3A3O00478 584 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 SSNA1O43805 119 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 EPN2O95208 641 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 TFPTP0C1Z6 253 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 COL6A1P12109 1028 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 NRG3P56975 720 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 LGALS3BPQ08380 585 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 CAPSQ13938 189 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 CBFBQ13951 182 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 TSNQ15631 228 aaKnown RBP8.72□□□□□ -1.01
RTN3-202ENST00000339997 INO80DQ53TQ3 878 aaPredicted RBP8.72□□□□□ -1.01
RTN3-202ENST00000339997 PCID2Q5JVF3 399 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 GPR158Q5T848 1215 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 RNF44Q7L0R7 432 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 RASGEF1CQ8N431 466 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 SLC44A1Q8WWI5 657 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 TNFRSF25Q93038 417 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 MOCOSQ96EN8 888 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 YME1L1Q96TA2 773 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 MTFR1LQ9H019 292 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 SPATC1LQ9H0A9 340 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 ASB8Q9H765 288 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 TMEM138Q9NPI0 162 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 CATSPERZQ9NTU4 200 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 MT-CYBP00156 380 aaPredicted RBP8.72□□□□□ -1.01
RTN3-202ENST00000339997 EIF2S1P05198 315 aaKnown RBP8.72□□□□□ -1.01
RTN3-202ENST00000339997 ZNF7P17097 686 aaPredicted RBP8.72□□□□□ -1.01
RTN3-202ENST00000339997 UBA1P22314 1058 aaKnown RBP8.72□□□□□ -1.01
RTN3-202ENST00000339997 HUNKP57058 714 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 DLG1Q12959 904 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 BNIP3Q12983 259 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 ANO7Q6IWH7 933 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 XRRA1Q6P2D8 792 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 CYP4Z1Q86W10 505 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 CERS5Q8N5B7 392 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 GMCL1P1Q8NEA9 526 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 ACTRT2Q8TDY3 377 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 UBXN6Q9BZV1 441 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 TTYH3Q9C0H2 523 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 ADGRE2Q9UHX3 823 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 DMTF1Q9Y222 760 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 DYRK1BQ9Y463 629 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 KLRG2A4D1S0 409 aaPredicted RBP8.72□□□□□ -1.01
RTN3-202ENST00000339997 H3BMM5 538 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 KPNA3O00505 521 aaPredicted RBP8.72□□□□□ -1.01
RTN3-202ENST00000339997 AZIN1O14977 448 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 ABHD2P08910 425 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 MAPK1P28482 360 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 SPDYCQ5MJ68 293 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 TXNRD3NBQ6F5E7 133 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 GLYATQ6IB77 296 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 KLHL24Q6TFL4 600 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 ARCQ7LC44 396 aa8.72□□□□□ -1.01
RTN3-202ENST00000339997 CHST15Q7LFX5 561 aaPredicted RBP8.72□□□□□ -1.01
RTN3-202ENST00000339997 PIWIL4Q7Z3Z4 852 aaKnown RBP8.72□□□□□ -1.01
RTN3-202ENST00000339997 COMMD2Q86X83 199 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms