RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 M0QX08 132 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 CFLARO15519 480 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ACSL4O60488 711 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 CD2P06729 351 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 WEE2P0C1S8 567 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PFKLP17858 780 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 HOXA10P31260 410 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 TIE1P35590 1138 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PITPNAQ00169 270 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ROR1Q01973 937 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 SCN1BQ07699 218 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 EHHADHQ08426 723 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 SEMA5AQ13591 1074 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PON3Q15166 354 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 CYP2A13Q16696 494 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PARP6Q2NL67 630 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 IZUMO2Q6UXV1 221 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ZNF410Q86VK4 478 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 C12orf40Q86WS4 652 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 TMC8Q8IU68 726 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 NPAS4Q8IUM7 802 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 C8orf59Q8N0T1 100 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 GPR152Q8TDT2 470 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PRICKLE1Q96MT3 831 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ACOX2Q99424 681 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 SLC38A3Q99624 504 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 HOPXQ9BPY8 73 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 TBCCD1Q9NVR7 557 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 GULP1Q9UBP9 304 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 NUFIP1Q9UHK0 495 aaKnown RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 SNX12Q9UMY4 172 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 CTNND2Q9UQB3 1225 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 RUVBL1Q9Y265 456 aaKnown RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 KCPQ6ZWJ8 1503 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 FAM86C2PA6NEL3 165 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 J3QR89 54 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 B3GALNT1O75752 331 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 NPPAP01160 153 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 CD63P08962 238 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 UGT1A5P35504 534 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 SELENOVP59797 346 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 NOMO3P69849 1222 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 RPL6Q02878 288 aaKnown RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 FGL1Q08830 312 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 NOMO1Q15155 1222 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 RSU1Q15404 277 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 CASP12Q6UXS9 341 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 SCARA5Q6ZMJ2 495 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 GSPT2Q8IYD1 628 aaKnown RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PIAS4Q8N2W9 510 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 TCAIMQ8N3R3 496 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 CEP76Q8TAP6 659 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 SH3RF3Q8TEJ3 882 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 CAVIN3Q969G5 261 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 C18orf8Q96DM3 657 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 SGF29Q96ES7 293 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 KAZALD1Q96I82 304 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 REEP2Q9BRK0 252 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 NUAK2Q9H093 628 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 KLHL11Q9NVR0 708 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 IGSF9Q9P2J2 1179 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 MAD2L2Q9UI95 211 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 FKBPLQ9UIM3 349 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 MAN2B2Q9Y2E5 1009 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 DGKBQ9Y6T7 804 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 TDRD15B5MCY1 1934 aaKnown RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PHIPQ8WWQ0 1821 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ISPDA4D126 451 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 E7EWF7 191 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 H0Y858 1186 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 EIF1AYO14602 144 aaKnown RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 SRGAP2O75044 1071 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 VPS26AO75436 327 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 IGHEP01854 428 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 GRIA2P42262 883 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ASMTP46597 345 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 EIF1AXP47813 144 aaKnown RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 UBE3AQ05086 875 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PNOCQ13519 176 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PLA2G4FQ68DD2 849 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 CYB5R4Q7L1T6 521 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 SPATA4Q8NEY3 305 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 EPS8L3Q8TE67 593 aaKnown RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 TNFRSF25Q93038 417 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ACE2Q9BYF1 805 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PLK2Q9NYY3 685 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PCDHGC3Q9UN70 934 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 CAPN14A8MX76 684 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 IFNA7P01567 189 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PTPN9P43378 593 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 CYCSP99999 105 aaKnown RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 TLE2Q04725 743 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 DDR1Q08345 913 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 RASGEF1BQ0VAM2 473 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ZBED5Q49AG3 693 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 NIPA1Q7RTP0 329 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 P4HA3Q7Z4N8 544 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PPIL6Q8IXY8 311 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 CFAP206Q8IYR0 622 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 LSMEM2Q8N112 164 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms