RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 BPIFA3Q9BQP9 254 aa19.55■□□□□ 0.72
ITGA4-202ENST00000339307 MRPL47Q9HD33 250 aaKnown RBP19.55■□□□□ 0.72
ITGA4-202ENST00000339307 AIPL1Q9NZN9 384 aa19.55■□□□□ 0.72
ITGA4-202ENST00000339307 CWC15Q9P013 229 aaKnown RBP19.55■□□□□ 0.72
ITGA4-202ENST00000339307 TTC24A2A3L6 582 aaPredicted RBP19.54■□□□□ 0.72
ITGA4-202ENST00000339307 H3BRJ5 948 aa19.54■□□□□ 0.72
ITGA4-202ENST00000339307 CACNB4O00305 520 aaPredicted RBP19.54■□□□□ 0.72
ITGA4-202ENST00000339307 DDX3XO00571 662 aaKnown RBP eCLIP19.54■□□□□ 0.72
ITGA4-202ENST00000339307 LRCH4O75427 683 aa19.54■□□□□ 0.72
ITGA4-202ENST00000339307 TCEA3O75764 348 aa19.54■□□□□ 0.72
ITGA4-202ENST00000339307 RECQL5O94762 991 aaPredicted RBP19.54■□□□□ 0.72
ITGA4-202ENST00000339307 ARL4AP40617 200 aa19.54■□□□□ 0.72
ITGA4-202ENST00000339307 ZNF165P49910 485 aa19.54■□□□□ 0.72
ITGA4-202ENST00000339307 RENBPP51606 427 aa19.54■□□□□ 0.72
ITGA4-202ENST00000339307 MTM1Q13496 603 aa19.54■□□□□ 0.72
ITGA4-202ENST00000339307 ZNF235Q14590 738 aa19.54■□□□□ 0.72
ITGA4-202ENST00000339307 RFTN1Q14699 578 aaPredicted RBP19.54■□□□□ 0.72
ITGA4-202ENST00000339307 LBRQ14739 615 aaKnown RBP19.54■□□□□ 0.72
ITGA4-202ENST00000339307 TDRD12Q587J7 1177 aaKnown RBP19.54■□□□□ 0.72
ITGA4-202ENST00000339307 E4F1Q66K89 784 aaPredicted RBP19.54■□□□□ 0.72
ITGA4-202ENST00000339307 DENND2CQ68D51 928 aa19.54■□□□□ 0.72
ITGA4-202ENST00000339307 CAVIN1Q6NZI2 390 aaKnown RBP19.54■□□□□ 0.72
ITGA4-202ENST00000339307 SEPT3Q9UH03 358 aa19.54■□□□□ 0.72
ITGA4-202ENST00000339307 LRRK1Q38SD2 2015 aa19.54■□□□□ 0.72
ITGA4-202ENST00000339307 DXOO77932 396 aaKnown RBP19.53■□□□□ 0.72
ITGA4-202ENST00000339307 NSUN2Q08J23 767 aaKnown RBP eCLIP19.53■□□□□ 0.72
ITGA4-202ENST00000339307 ARHGAP40Q5TG30 622 aa19.53■□□□□ 0.72
ITGA4-202ENST00000339307 AFMIDQ63HM1 303 aa19.53■□□□□ 0.72
ITGA4-202ENST00000339307 LVRNQ6Q4G3 990 aa19.53■□□□□ 0.72
ITGA4-202ENST00000339307 TAF8Q7Z7C8 310 aa19.53■□□□□ 0.72
ITGA4-202ENST00000339307 PSTKQ8IV42 348 aaKnown RBP19.53■□□□□ 0.72
ITGA4-202ENST00000339307 TP53INP2Q8IXH6 220 aa19.53■□□□□ 0.72
ITGA4-202ENST00000339307 WDR48Q8TAF3 677 aa19.53■□□□□ 0.72
ITGA4-202ENST00000339307 FNIP1Q8TF40 1166 aa19.53■□□□□ 0.72
ITGA4-202ENST00000339307 CCDC74AQ96AQ1 378 aa19.53■□□□□ 0.72
ITGA4-202ENST00000339307 GRAMD1AQ96CP6 724 aa19.53■□□□□ 0.72
ITGA4-202ENST00000339307 PDXPQ96GD0 296 aa19.53■□□□□ 0.72
ITGA4-202ENST00000339307 HIC2Q96JB3 615 aa19.53■□□□□ 0.72
ITGA4-202ENST00000339307 SUDS3Q9H7L9 328 aaPredicted RBP19.53■□□□□ 0.72
ITGA4-202ENST00000339307 CPNE5Q9HCH3 593 aa19.53■□□□□ 0.72
ITGA4-202ENST00000339307 ASCL3Q9NQ33 180 aa19.53■□□□□ 0.72
ITGA4-202ENST00000339307 BAHCC1Q9P281 2608 aa19.53■□□□□ 0.72
ITGA4-202ENST00000339307 IGSF10Q6WRI0 2623 aa19.53■□□□□ 0.72
ITGA4-202ENST00000339307 A0A1W2PQC6 194 aa19.52■□□□□ 0.72
ITGA4-202ENST00000339307 TNFSF15O95150 251 aa19.52■□□□□ 0.72
ITGA4-202ENST00000339307 MYBL1P10243 752 aa19.52■□□□□ 0.72
ITGA4-202ENST00000339307 AMPD1P23109 780 aa19.52■□□□□ 0.72
ITGA4-202ENST00000339307 PRKCIP41743 596 aa19.52■□□□□ 0.72
ITGA4-202ENST00000339307 HCAR3P49019 387 aa19.52■□□□□ 0.72
ITGA4-202ENST00000339307 TMPRSS3P57727 454 aa19.52■□□□□ 0.72
ITGA4-202ENST00000339307 AP1S1P61966 158 aa19.52■□□□□ 0.72
ITGA4-202ENST00000339307 SLC10A7Q0GE19 358 aa19.52■□□□□ 0.72
ITGA4-202ENST00000339307 RALGDSQ12967 914 aa19.52■□□□□ 0.72
ITGA4-202ENST00000339307 TMCO4Q5TGY1 634 aa19.52■□□□□ 0.72
ITGA4-202ENST00000339307 TMCO3Q6UWJ1 677 aa19.52■□□□□ 0.72
ITGA4-202ENST00000339307 LIPIQ6XZB0 460 aa19.52■□□□□ 0.72
ITGA4-202ENST00000339307 ARL14Q8N4G2 192 aa19.52■□□□□ 0.72
ITGA4-202ENST00000339307 LZTR1Q8N653 840 aa19.52■□□□□ 0.72
ITGA4-202ENST00000339307 Q8N9G6 341 aaPredicted RBP19.52■□□□□ 0.72
ITGA4-202ENST00000339307 OR56A4Q8NGH8 313 aa19.52■□□□□ 0.72
ITGA4-202ENST00000339307 SLC46A1Q96NT5 459 aa19.52■□□□□ 0.72
ITGA4-202ENST00000339307 GFM1Q96RP9 751 aaKnown RBP19.52■□□□□ 0.72
ITGA4-202ENST00000339307 EPB41L5Q9HCM4 733 aa19.52■□□□□ 0.72
ITGA4-202ENST00000339307 MRPL40Q9NQ50 206 aaKnown RBP19.52■□□□□ 0.72
ITGA4-202ENST00000339307 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.52■□□□□ 0.72
ITGA4-202ENST00000339307 LOC400499M0QZD8 3231 aa19.52■□□□□ 0.72
ITGA4-202ENST00000339307 ANKRD36A6QL64 1941 aa19.51■□□□□ 0.71
ITGA4-202ENST00000339307 A0A1B0GTH6 734 aa19.51■□□□□ 0.71
ITGA4-202ENST00000339307 TEX51A0A1B0GUA7 166 aa19.51■□□□□ 0.71
ITGA4-202ENST00000339307 PMS2P1A4D2B8 440 aa19.51■□□□□ 0.71
ITGA4-202ENST00000339307 AGRPO00253 132 aa19.51■□□□□ 0.71
ITGA4-202ENST00000339307 ATXN7O15265 892 aaPredicted RBP19.51■□□□□ 0.71
ITGA4-202ENST00000339307 RPLP0P05388 317 aaKnown RBP19.51■□□□□ 0.71
ITGA4-202ENST00000339307 SSR1P43307 286 aaKnown RBP19.51■□□□□ 0.71
ITGA4-202ENST00000339307 ZNF135P52742 658 aaPredicted RBP19.51■□□□□ 0.71
ITGA4-202ENST00000339307 C19orf57Q0VDD7 668 aa19.51■□□□□ 0.71
ITGA4-202ENST00000339307 DPYSQ14117 519 aa19.51■□□□□ 0.71
ITGA4-202ENST00000339307 TAF1BQ53T94 588 aaPredicted RBP19.51■□□□□ 0.71
ITGA4-202ENST00000339307 CYP4V2Q6ZWL3 525 aaPredicted RBP19.51■□□□□ 0.71
ITGA4-202ENST00000339307 BBS5Q8N3I7 341 aa19.51■□□□□ 0.71
ITGA4-202ENST00000339307 SDR16C5Q8N3Y7 309 aa19.51■□□□□ 0.71
ITGA4-202ENST00000339307 FAM46DQ8NEK8 389 aa19.51■□□□□ 0.71
ITGA4-202ENST00000339307 WDR36Q8NI36 951 aaKnown RBP19.51■□□□□ 0.71
ITGA4-202ENST00000339307 NSMCE1Q8WV22 266 aa19.51■□□□□ 0.71
ITGA4-202ENST00000339307 FUBP1Q96AE4 644 aaKnown RBP19.51■□□□□ 0.71
ITGA4-202ENST00000339307 PCDHGC4Q9Y5F7 938 aa19.51■□□□□ 0.71
ITGA4-202ENST00000339307 RP1P56715 2156 aa19.51■□□□□ 0.71
ITGA4-202ENST00000339307 CCDC187A0A096LP49 1063 aa19.51■□□□□ 0.71
ITGA4-202ENST00000339307 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.51■□□□□ 0.71
ITGA4-202ENST00000339307 A0A1W2PNU3 283 aaPredicted RBP19.51■□□□□ 0.71
ITGA4-202ENST00000339307 CFAP69A5D8W1 941 aa19.51■□□□□ 0.71
ITGA4-202ENST00000339307 GOLGA6CA6NDK9 693 aa19.51■□□□□ 0.71
ITGA4-202ENST00000339307 GOLGA6BA6NDN3 693 aa19.51■□□□□ 0.71
ITGA4-202ENST00000339307 TMEM202A6NGA9 273 aa19.51■□□□□ 0.71
ITGA4-202ENST00000339307 GOLGA6DP0CG33 693 aa19.51■□□□□ 0.71
ITGA4-202ENST00000339307 KELP23276 732 aa19.51■□□□□ 0.71
ITGA4-202ENST00000339307 IL1R2P27930 398 aa19.51■□□□□ 0.71
ITGA4-202ENST00000339307 UCNP55089 124 aa19.51■□□□□ 0.71
ITGA4-202ENST00000339307 CCL7P80098 99 aa19.51■□□□□ 0.71
ITGA4-202ENST00000339307 AGERQ15109 404 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms