RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 PSME2Q9UL46 239 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 ADAM23O75077 832 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 FCGR1AP12314 374 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 SLC2A4P14672 509 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 CSTF3Q12996 717 aaKnown RBP16.13■□□□□ 0.17
NPHP3-201ENST00000337331 TMEM132BQ14DG7 1078 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 FAM126BQ8IXS8 530 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 FNDC5Q8NAU1 212 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 PDPRQ8NCN5 879 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 METTL6Q8TCB7 284 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 SLC39A3Q9BRY0 314 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 BDH2Q9BUT1 245 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 ADGRE3Q9BY15 652 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 ZNF717Q9BY31 904 aaPredicted RBP16.13■□□□□ 0.17
NPHP3-201ENST00000337331 SENP6Q9GZR1 1112 aaPredicted RBP16.13■□□□□ 0.17
NPHP3-201ENST00000337331 IL22Q9GZX6 179 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 GBA3Q9H227 469 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 POLG2Q9UHN1 485 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 NFASCO94856 1347 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 CAMTA1Q9Y6Y1 1673 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 ADM5C9JUS6 153 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 PDHXO00330 501 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 GUCA1CO95843 209 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 PTPN1P18031 435 aaKnown RBP16.13■□□□□ 0.17
NPHP3-201ENST00000337331 ENDOUP21128 410 aaKnown RBP16.13■□□□□ 0.17
NPHP3-201ENST00000337331 GABRB2P47870 512 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 IKBKEQ14164 716 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 C8orf59Q8N0T1 100 aaPredicted RBP16.13■□□□□ 0.17
NPHP3-201ENST00000337331 DCAKDQ8WVC6 231 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 TRUB1Q8WWH5 349 aaKnown RBP16.13■□□□□ 0.17
NPHP3-201ENST00000337331 ZHX1-C8orf76Q96EF9 292 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 POMKQ9H5K3 350 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 BCAS3Q9H6U6 928 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 ITM2CQ9NQX7 267 aa16.13■□□□□ 0.17
NPHP3-201ENST00000337331 DHRS12A0PJE2 317 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 HDAC3O15379 428 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 SYNCRIPO60506 623 aaKnown RBP16.12■□□□□ 0.17
NPHP3-201ENST00000337331 CDH1P12830 882 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 GOT1P17174 413 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 RPL10P27635 214 aaKnown RBP16.12■□□□□ 0.17
NPHP3-201ENST00000337331 SLC7A2P52569 658 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 HADHBP55084 474 aaKnown RBP16.12■□□□□ 0.17
NPHP3-201ENST00000337331 CDKL1Q00532 357 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 NAB1Q13506 487 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 CRY2Q49AN0 593 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 ARMCX4Q5H9R4 360 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 CELF3Q5SZQ8 465 aaKnown RBP16.12■□□□□ 0.17
NPHP3-201ENST00000337331 CYP2U1Q7Z449 544 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 PGAM4Q8N0Y7 254 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 TP63Q9H3D4 680 aaPredicted RBP16.12■□□□□ 0.17
NPHP3-201ENST00000337331 KLHL20Q9Y2M5 609 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 DISP2A7MBM2 1401 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 CRYZL1O95825 349 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 TM4SF1P30408 202 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 RAB39AQ14964 217 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 ANKS3Q6ZW76 656 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 BBS7Q8IWZ6 715 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 B3GALNT2Q8NCR0 500 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 ERGIC3Q9Y282 383 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 WBP11Q9Y2W2 641 aaKnown RBP16.12■□□□□ 0.17
NPHP3-201ENST00000337331 LOC100506127A0A0U1RQW1 187 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 AQP9O43315 295 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 NPM3O75607 178 aaKnown RBP16.12■□□□□ 0.17
NPHP3-201ENST00000337331 EPN2O95208 641 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 DNAJB2P25686 324 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 IVDP26440 423 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 C9orf131Q5VYM1 1079 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 LRRC49Q8IUZ0 686 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 ATG16L2Q8NAA4 619 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 TBL1YQ9BQ87 522 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 KCNK13Q9HB14 408 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 SPAG4Q9NPE6 437 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 TRMT13Q9NUP7 481 aaKnown RBP16.12■□□□□ 0.17
NPHP3-201ENST00000337331 KANSL3Q9P2N6 904 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 SNCAIPQ9Y6H5 919 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 KIF1AQ12756 1690 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 KRT87PA6NCN2 255 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 SPATA31C2B4DYI2 1134 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 SMIM18P0DKX4 95 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 NFKB1P19838 968 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 EPHX2P34913 555 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 RAB14P61106 215 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 GK5Q6ZS86 529 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 C11orf96Q7Z7L8 435 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 MMAAQ8IVH4 418 aaKnown RBP16.12■□□□□ 0.17
NPHP3-201ENST00000337331 FAR1Q8WVX9 515 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 CDCA5Q96FF9 252 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 SERPINB11Q96P15 392 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 ACE2Q9BYF1 805 aaPredicted RBP16.12■□□□□ 0.17
NPHP3-201ENST00000337331 RMND5AQ9H871 391 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 CACNA2D2Q9NY47 1150 aa16.12■□□□□ 0.17
NPHP3-201ENST00000337331 WBP4O75554 376 aaKnown RBP16.11■□□□□ 0.17
NPHP3-201ENST00000337331 TOP3BO95985 862 aaKnown RBP16.11■□□□□ 0.17
NPHP3-201ENST00000337331 FGFR1P11362 822 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 TSHRP16473 764 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 ERCC2P18074 760 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 POU1F1P28069 291 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 LRP8Q14114 963 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 VGLL4Q14135 290 aa16.11■□□□□ 0.17
NPHP3-201ENST00000337331 GRM2Q14416 872 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms