RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 RAB11FIP5Q9BXF6 653 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 ZFYVE1Q9HBF4 777 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.31□□□□□ -0.44
FN1-202ENST00000336916 GRSF1Q12849 480 aaKnown RBP eCLIP12.31□□□□□ -0.44
FN1-202ENST00000336916 AHI1Q8N157 1196 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 KCTD13Q8WZ19 329 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 OXNAD1Q96HP4 312 aaPredicted RBP12.31□□□□□ -0.44
FN1-202ENST00000336916 KCNF1Q9H3M0 494 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 SNX7Q9UNH6 387 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 UBIAD1Q9Y5Z9 338 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 NCANO14594 1321 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 MRC1P22897 1456 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 LYNP07948 512 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 CCNYL3P0C7X3 344 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 ATP6V1B1P15313 513 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 RAB2AP61019 212 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 GPAT3Q53EU6 434 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 CERCAMQ5T4B2 595 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 CAPN13Q6MZZ7 669 aaPredicted RBP12.31□□□□□ -0.44
FN1-202ENST00000336916 ADGRG2Q8IZP9 1017 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 TEX47Q8TBZ9 253 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 TCP10LQ8TDR4 215 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 TRAPPC9Q96Q05 1148 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 SLC28A3Q9HAS3 691 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 DMGDHQ9UI17 866 aaKnown RBP12.31□□□□□ -0.44
FN1-202ENST00000336916 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.31□□□□□ -0.44
FN1-202ENST00000336916 MTF2Q9Y483 593 aaPredicted RBP12.31□□□□□ -0.44
FN1-202ENST00000336916 RTTNQ86VV8 2226 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 IRF6O14896 467 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 COL6A2P12110 1019 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 OR4L1Q8NH43 312 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 KLF6Q99612 283 aaPredicted RBP12.31□□□□□ -0.44
FN1-202ENST00000336916 GPR20Q99678 358 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 SPATA9Q9BWV2 254 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 ASB3Q9Y575 518 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 PCDHA2Q9Y5H9 948 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 SRRM3A6NNA2 597 aaPredicted RBP12.31□□□□□ -0.44
FN1-202ENST00000336916 TPST1O60507 370 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 PRKAR2AP13861 404 aaKnown RBP12.31□□□□□ -0.44
FN1-202ENST00000336916 MRPS5P82675 430 aaKnown RBP12.31□□□□□ -0.44
FN1-202ENST00000336916 HSPA14Q0VDF9 509 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 BMT2Q1RMZ1 405 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 DGKKQ5KSL6 1271 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 IFNL1Q8IU54 200 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 AMER2Q8N7J2 671 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 PJA1Q8NG27 643 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 MRPL39Q9NYK5 338 aaKnown RBP12.31□□□□□ -0.44
FN1-202ENST00000336916 HAO1Q9UJM8 370 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 PIKFYVEQ9Y2I7 2098 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 VSTM5A8MXK1 200 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 HGFP14210 728 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 EPORP19235 508 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 SPATA19Q7Z5L4 167 aa12.31□□□□□ -0.44
FN1-202ENST00000336916 FAM86C2PA6NEL3 165 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 IRAK2O43187 625 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 GMFBP60983 142 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 AKT1S1Q96B36 256 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 NACC2Q96BF6 587 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 CLIC5Q9NZA1 410 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 DLGAP2Q9P1A6 1054 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 GULP1Q9UBP9 304 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 MCM3APO60318 1980 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 NFAT5O94916 1531 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 ASLP04424 464 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 RFC2P35250 354 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 TAS2R41P59536 307 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 LDLRAP1Q5SW96 308 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 DCAKDQ8WVC6 231 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 PXDNQ92626 1479 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 KCNK1O00180 336 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 PSMD10O75832 226 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 FGBP02675 491 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 CRATP43155 626 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 BEX3Q00994 111 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 MEA1Q16626 185 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 TIMM13Q9Y5L4 95 aaPredicted RBP12.3□□□□□ -0.44
FN1-202ENST00000336916 PGM2Q96G03 612 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 RNF157Q96PX1 679 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 CAPN6Q9Y6Q1 641 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 RPL21P46778 160 aaKnown RBP12.3□□□□□ -0.44
FN1-202ENST00000336916 LARS2Q15031 903 aaKnown RBP12.3□□□□□ -0.44
FN1-202ENST00000336916 ZFPM1Q8IX07 1006 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 DHRSXQ8N5I4 330 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 ALLCQ8N6M5 410 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 TRPV3Q8NET8 790 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 HPS4Q9NQG7 708 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 GGA2Q9UJY4 613 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 RGSL1A5PLK6 1076 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 MAP3K6O95382 1288 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 TRAF3Q13114 568 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 NATD1Q8N6N6 113 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 SUN3Q8TAQ9 357 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 MFSD14AQ96MC6 490 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 RNF145Q96MT1 663 aa12.3□□□□□ -0.44
FN1-202ENST00000336916 PSMB4P28070 264 aa12.29□□□□□ -0.44
FN1-202ENST00000336916 CSNK2BP67870 215 aa12.29□□□□□ -0.44
FN1-202ENST00000336916 PFKPQ01813 784 aa12.29□□□□□ -0.44
FN1-202ENST00000336916 RFTN1Q14699 578 aaPredicted RBP12.29□□□□□ -0.44
FN1-202ENST00000336916 ZNF276Q8N554 614 aa12.29□□□□□ -0.44
FN1-202ENST00000336916 CCNB1IP1Q9NPC3 277 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms