RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 DFFBO76075 338 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 RAB27AP51159 221 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 MXD4Q14582 209 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 ACOX1Q15067 660 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 DHX32Q7L7V1 743 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 DEPDC4Q8N2C3 294 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 MFSD8Q8NHS3 518 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 LMLNQ96KR4 655 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 OR11A1Q9GZK7 315 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 EPB41L4BQ9H329 900 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 TBC1D17Q9HA65 648 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 KCNH7Q9NS40 1196 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 GTSE1Q9NYZ3 720 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 RIMKLBQ9ULI2 386 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 KCNJ14Q9UNX9 436 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 E9PI62 339 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 SLC33A1O00400 549 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 LAD1O00515 517 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 NUAK1O60285 661 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 CUTAO60888 179 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 SLC16A8O95907 504 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 RLN2P04090 185 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 CHMP24386 653 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 LIMK1P53667 647 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 ZNF267Q14586 743 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 FAM131AQ6UXB0 335 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 ETV3LQ6ZN32 361 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 TDRPQ86YL5 185 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 EEF2KMTQ96G04 330 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 MTG1Q9BT17 334 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 USP36Q9P275 1121 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 PNMA8BQ9ULN7 279 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 PCDHA1Q9Y5I3 950 aa6.09□□□□□ -1.43
CDC42BPA-201ENST00000334218 KDM4FA0A1W2PPD8 638 aa6.09□□□□□ -1.44
CDC42BPA-201ENST00000334218 TESPA1A2RU30 521 aaPredicted RBP6.09□□□□□ -1.44
CDC42BPA-201ENST00000334218 SUPT3HB4E1H0 165 aa6.09□□□□□ -1.44
CDC42BPA-201ENST00000334218 PSMG1O95456 288 aa6.09□□□□□ -1.44
CDC42BPA-201ENST00000334218 MT-CO2P00403 227 aa6.09□□□□□ -1.44
CDC42BPA-201ENST00000334218 PKMP14618 531 aaKnown RBP6.09□□□□□ -1.44
CDC42BPA-201ENST00000334218 CDH8P55286 799 aa6.09□□□□□ -1.44
CDC42BPA-201ENST00000334218 HNRNPKP61978 463 aaKnown RBP eCLIP6.09□□□□□ -1.442e-6■■■■■ 27.5
CDC42BPA-201ENST00000334218 SLC27A3Q5K4L6 730 aa6.09□□□□□ -1.44
CDC42BPA-201ENST00000334218 ILDR2Q71H61 639 aa6.09□□□□□ -1.44
CDC42BPA-201ENST00000334218 CXXC5Q7LFL8 322 aaKnown RBP6.09□□□□□ -1.44
CDC42BPA-201ENST00000334218 TMC7Q7Z402 723 aa6.09□□□□□ -1.44
CDC42BPA-201ENST00000334218 LINS1Q8NG48 757 aa6.09□□□□□ -1.44
CDC42BPA-201ENST00000334218 ESR2Q92731 530 aa6.09□□□□□ -1.44
CDC42BPA-201ENST00000334218 SMARCD1Q96GM5 515 aa6.09□□□□□ -1.44
CDC42BPA-201ENST00000334218 ADAM2Q99965 735 aa6.09□□□□□ -1.44
CDC42BPA-201ENST00000334218 FAM83CQ9BQN1 747 aa6.09□□□□□ -1.44
CDC42BPA-201ENST00000334218 BTBD2Q9BX70 525 aa6.09□□□□□ -1.44
CDC42BPA-201ENST00000334218 CST11Q9H112 138 aa6.09□□□□□ -1.44
CDC42BPA-201ENST00000334218 TAS2R3Q9NYW6 316 aa6.09□□□□□ -1.44
CDC42BPA-201ENST00000334218 GRID1Q9ULK0 1009 aa6.09□□□□□ -1.44
CDC42BPA-201ENST00000334218 RNF123Q5XPI4 1314 aa6.09□□□□□ -1.44
CDC42BPA-201ENST00000334218 CARNS1A5YM72 827 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 M0R233 179 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 FGGP02679 453 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 BDNFP23560 247 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 CCNE1P24864 410 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 RFC5P40937 340 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF234Q14588 700 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 ASPRV1Q53RT3 343 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 ARPINQ7Z6K5 226 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 KLHDC1Q8N7A1 406 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 BAP1Q92560 729 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 SGIP1Q9BQI5 828 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 CORO1BQ9BR76 489 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 CBX8Q9HC52 389 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 GNG13Q9P2W3 67 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 CDYLQ9Y232 598 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 BLMP54132 1417 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 TNFRSF10AO00220 468 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 CSDE1O75534 798 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 DNAJB5O75953 348 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 ATG7O95352 703 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 THRAP10827 490 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 PPIGQ13427 754 aaKnown RBP eCLIP6.08□□□□□ -1.447e-7■■■□□ 16
CDC42BPA-201ENST00000334218 AAGABQ6PD74 315 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 SEPT12Q8IYM1 358 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZSCAN1Q8NBB4 408 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 SLC20A1Q8WUM9 679 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 NAT14Q8WUY8 206 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 FBXO32Q969P5 355 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 FAM167AQ96KS9 214 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 PXMP2Q9NR77 195 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 ABCB8Q9NUT2 735 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 MAP3K19Q56UN5 1328 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 NCF1BA6NI72 391 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 NCF1CA8MVU1 366 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 NPIPA5E9PKD4 350 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 NPIPA3F8WFD2 350 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 CHL1O00533 1208 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 RAD51CO43502 376 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 HOXB7P09629 217 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 PTDSS1P48651 473 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 CYP4Z1Q86W10 505 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 NAT16Q8N8M0 369 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 RBM17Q96I25 401 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 PNKPQ96T60 521 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms