RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 AIF1P55008 147 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 ESRRGP62508 458 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 ECT2LQ008S8 904 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 SQLEQ14534 574 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 RAP1GAP2Q684P5 730 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 EFHBQ8N7U6 833 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 SPPL2BQ8TCT7 592 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 GRIN3AQ8TCU5 1115 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 FCRL5Q96RD9 977 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 PARK7Q99497 189 aaKnown RBP12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 OSBPL2Q9H1P3 480 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 PTCH2Q9Y6C5 1203 aa12.95□□□□□ -0.34
HMGCS1-201ENST00000325110 RGPD3A6NKT7 1758 aaPredicted RBP12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 RGPD4Q7Z3J3 1758 aa12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 UBXN8O00124 270 aa12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 IRAK2O43187 625 aa12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 CHRM1P11229 460 aaPredicted RBP12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 MAGEA12P43365 314 aa12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 PGFP49763 221 aa12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 MGAT5BQ3V5L5 792 aa12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 TSTD2Q5T7W7 516 aa12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 PSMG2Q969U7 264 aa12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 UNC93B1Q9H1C4 597 aa12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 TBC1D13Q9NVG8 400 aa12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 A0A0J9YYE9 177 aa12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 SCAMP3O14828 347 aaKnown RBP12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 MAFKO60675 156 aa12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 SOAT2O75908 522 aa12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 RHOBTB1O94844 696 aa12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 COL6A2P12110 1019 aa12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 HSPA13P48723 471 aa12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 ARSDP51689 593 aa12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 SH3BGRP55822 239 aaPredicted RBP12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 SEMA3BQ13214 749 aa12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 INTS6LQ5JSJ4 861 aaKnown RBP12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 SAMD4BQ5PRF9 694 aaKnown RBP12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 TIGD7Q6NT04 549 aaPredicted RBP12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 PDZD8Q8NEN9 1154 aa12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 HMCESQ96FZ2 354 aa12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 ZFRQ96KR1 1074 aaKnown RBP12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 ZNF512Q96ME7 567 aaPredicted RBP12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 PPP1R10Q96QC0 940 aaKnown RBP12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 SLC29A1Q99808 456 aa12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 C1orf50Q9BV19 199 aa12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 MRPS26Q9BYN8 205 aaKnown RBP12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 MRPL40Q9NQ50 206 aaKnown RBP12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 HEMK1Q9Y5R4 338 aaPredicted RBP12.94□□□□□ -0.34
HMGCS1-201ENST00000325110 HGFP14210 728 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 IL10P22301 178 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 ARNTP27540 789 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 SCAPQ12770 1279 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 OTUD3Q5T2D3 398 aaPredicted RBP12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 CLVS1Q8IUQ0 354 aaPredicted RBP12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 MARVELD2Q8N4S9 558 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 TMIGD2Q96BF3 282 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 CCDC126Q96EE4 140 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 C19orf60Q96EN9 201 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 ZNF419Q96HQ0 510 aaPredicted RBP12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 MRGPRX2Q96LB1 330 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 SEMA3CQ99985 751 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 MARCH4Q9P2E8 410 aaPredicted RBP12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 THEGQ9P2T0 379 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 RAD54BQ9Y620 910 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 PARP14Q460N5 1801 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 GABRDO14764 452 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 GJB3O75712 270 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 CNTN5O94779 1100 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 OR1G1P47890 313 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 GALK1P51570 392 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 RENBPP51606 427 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 RBBP7Q16576 425 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 C10orf120Q5SQS8 335 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 LRRTM3Q86VH5 581 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 OFCC1Q8IZS5 231 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 CBR4Q8N4T8 237 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 METTL25Q8N6Q8 603 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 ASB9Q96DX5 294 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 NSUN5Q96P11 429 aaKnown RBP12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 PRKD2Q9BZL6 878 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 AGO3Q9H9G7 860 aaKnown RBP12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 ABCC13Q9NSE7 274 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 MYRFQ9Y2G1 1151 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 ITGB1P05556 798 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 PYGLP06737 847 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 HAPLN1P10915 354 aaPredicted RBP12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 NCK1P16333 377 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 GRK4P32298 578 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 HCAR3P49019 387 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 GPR15P49685 360 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 LSAMPQ13449 338 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 FRG1Q14331 258 aaKnown RBP12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 ARHGAP12Q8IWW6 846 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 OR10T2Q8NGX3 314 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 VPS50Q96JG6 964 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 FAR2Q96K12 515 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 CYP2S1Q96SQ9 504 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 PCDHGA7Q9Y5G6 932 aa12.93□□□□□ -0.34
HMGCS1-201ENST00000325110 H3BMM5 538 aa12.92□□□□□ -0.34
HMGCS1-201ENST00000325110 PIP5K1BO14986 540 aa12.92□□□□□ -0.34
HMGCS1-201ENST00000325110 NPHS1O60500 1241 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms