RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	MLLT6	P55198	1093 aa	Predicted RBP	11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	SLC34A1	Q06495	639 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	SPRED3	Q2MJR0	410 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	PABPC1L	Q4VXU2	614 aa	Known RBP	11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	UBXN11	Q5T124	520 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	LIPM	Q5VYY2	423 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	C17orf99	Q6UX52	265 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	FAM162A	Q96A26	154 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	GPR21	Q99679	349 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	CENPK	Q9BS16	269 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	UNC93B1	Q9H1C4	597 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	DENND2D	Q9H6A0	471 aa	Predicted RBP	11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	WDR41	Q9HAD4	459 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	MRPL40	Q9NQ50	206 aa	Known RBP	11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	TMEM161A	Q9NX61	479 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	EGFL7	Q9UHF1	273 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	CD84	Q9UIB8	345 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	MRPS23	Q9Y3D9	190 aa	Known RBP	11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	PAPPA	Q13219	1627 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	TMEM233	B4DJY2	109 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	GSC2	O15499	205 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	PFKM	P08237	780 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	SLC1A2	P43004	574 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	UPP1	Q16831	310 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	LRRC74B	Q6ZQY2	392 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	GK5	Q6ZS86	529 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	TDRP	Q86YL5	185 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	NPW	Q8N729	165 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	HEXDC	Q8WVB3	486 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	APBB2	Q92870	758 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	LINGO1	Q96FE5	620 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	CACYBP	Q9HB71	228 aa	Known RBP	11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	SLC45A1	Q9Y2W3	748 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	TCAF1	Q9Y4C2	921 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	KANSL1L	A0AUZ9	987 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	SRRM3	A6NNA2	597 aa	Predicted RBP	11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	ENPP3	O14638	875 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	MGEA5	O60502	916 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	PSMG1	O95456	288 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	PCNA	P12004	261 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	NELFE	P18615	380 aa	Known RBP	11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	SOAT1	P35610	550 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	NRG1	Q02297	640 aa	Predicted RBP	11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	PLD6	Q8N2A8	252 aa	Known RBP	11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	STAG3L4	Q8TBR4	150 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	NUP205	Q92621	2012 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	INPP5D	Q92835	1189 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	LENG8	Q96PV6	779 aa	Predicted RBP	11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	SMG9	Q9H0W8	520 aa	Known RBP	11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	VRTN	Q9H8Y1	702 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	SPG21	Q9NZD8	308 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	FKBPL	Q9UIM3	349 aa		11.88	□□□□□ -0.51
DDR1-223	ENST00000324771	GNG14	A0A1W2PPG7	69 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	SLC38A8	A6NNN8	435 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	SLCO1B7	G3V0H7	640 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	ARVCF	O00192	962 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	SNUPN	O95149	360 aa	Known RBP	11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	SIX3	O95343	332 aa	Predicted RBP	11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	SERPINA4	P29622	427 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	CLCN5	P51795	746 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	CBX2	Q14781	532 aa	Predicted RBP	11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	RBM20	Q5T481	1227 aa	Known RBP	11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	RNF19B	Q6ZMZ0	732 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	RINL	Q6ZS11	566 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	ARC	Q7LC44	396 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	CAMK1D	Q8IU85	385 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	FAM126B	Q8IXS8	530 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	SLC25A51	Q9H1U9	297 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	EPB41L4B	Q9H329	900 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	PARVB	Q9HBI1	364 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	CAPN10	Q9HC96	672 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	CROT	Q9UKG9	612 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	SCN7A	Q01118	1682 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771		A0A0D9SEW6	157 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771		A0A1W2PQ45	241 aa	Predicted RBP	11.87	□□□□□ -0.51
DDR1-223	ENST00000324771		A0A1W2PQY0	241 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771		A0A1W2PRU2	124 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	SCAMP1	O15126	338 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	ME2	P23368	584 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	EEF1D	P29692	281 aa	Known RBP	11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	GSS	P48637	474 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	DSG1	Q02413	1049 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	PPID	Q08752	370 aa	Known RBP	11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	HNRNPD	Q14103	355 aa	Known RBP	11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	TRAPPC5	Q8IUR0	188 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	ULK2	Q8IYT8	1036 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	CLHC1	Q8NHS4	586 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	MRPL57	Q9BQC6	102 aa	Known RBP	11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	TAS2R1	Q9NYW7	299 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	NENF	Q9UMX5	172 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	NDUFAF1	Q9Y375	327 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	RAP2C	Q9Y3L5	183 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	ABCA3	Q99758	1704 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771		A0A0U1RQS6	177 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771		A0A1W2PQ67	120 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	EOMES	O95936	686 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	GOT2	P00505	430 aa	Known RBP	11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	AHSG	P02765	367 aa		11.87	□□□□□ -0.51
DDR1-223	ENST00000324771	LRPAP1	P30533	357 aa		11.87	□□□□□ -0.51

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