RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 DNAAF2Q9NVR5 837 aaKnown RBP7.93□□□□□ -1.14
CIITA-201ENST00000324288 RGL2O15211 777 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 TRMUO75648 421 aaKnown RBP7.93□□□□□ -1.14
CIITA-201ENST00000324288 MMP13P45452 471 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 BEX3Q00994 111 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 CHCHD6Q9BRQ6 235 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 C12orf65Q9H3J6 166 aaKnown RBP7.93□□□□□ -1.14
CIITA-201ENST00000324288 NEK6Q9HC98 313 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 YARS2Q9Y2Z4 477 aaKnown RBP7.93□□□□□ -1.14
CIITA-201ENST00000324288 NCOR1O75376 2440 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 LACTBL1A8MY62 500 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 NDUFS2O75306 463 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 OR56A5P0C7T3 313 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 FMO3P31513 532 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 ITIH5Q86UX2 942 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 PARGQ86W56 976 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 MCOLN3Q8TDD5 553 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 AKT1S1Q96B36 256 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 FEM1CQ96JP0 617 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 ZNF354BQ96LW1 612 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 VAT1Q99536 393 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 FRMD8P1Q9BZ68 369 aaPredicted RBP7.93□□□□□ -1.14
CIITA-201ENST00000324288 TUT1Q9H6E5 874 aaKnown RBP7.93□□□□□ -1.14
CIITA-201ENST00000324288 CNOT6Q9ULM6 557 aaKnown RBP7.93□□□□□ -1.14
CIITA-201ENST00000324288 SNX6Q9UNH7 406 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 ABCG2Q9UNQ0 655 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 OTOFQ9HC10 1997 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 GSAPA4D1B5 854 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 MCIDASD6RGH6 385 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 DBIP07108 87 aaKnown RBP7.93□□□□□ -1.14
CIITA-201ENST00000324288 TFPTP0C1Z6 253 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 NAMPTP43490 491 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 PIK3CGP48736 1102 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 TPTEP56180 551 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 ACSM2AQ08AH3 577 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 ACSM2BQ68CK6 577 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 RAET1GQ6H3X3 334 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 MEIOBQ8N635 442 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 OR4A15Q8NGL6 344 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 KAT2AQ92830 837 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 SPON1Q9HCB6 807 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 STARD7Q9NQZ5 370 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 RASSF1Q9NS23 344 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 GIN1Q9NXP7 522 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 ANGPT4Q9Y264 503 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 MTF2Q9Y483 593 aaPredicted RBP7.93□□□□□ -1.14
CIITA-201ENST00000324288 ARHGEF33A8MVX0 844 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 IGSF6O95976 241 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 SERPINA1P01009 418 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 UQCRBP14927 111 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 CTPS1P17812 591 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 CCNCP24863 283 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 NAGLUP54802 743 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 CDKL1Q00532 357 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 FBXL19Q6PCT2 694 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 KIAA1324Q6UXG2 1013 aaKnown RBP7.93□□□□□ -1.14
CIITA-201ENST00000324288 MCOLN2Q8IZK6 566 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 SLC34A3Q8N130 599 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 TIMMDC1Q9NPL8 285 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 RPS6KA6Q9UK32 745 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 U3KQV3 271 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 LHX1P48742 406 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 CYP2A13Q16696 494 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 OGFRL1Q5TC84 451 aaPredicted RBP7.93□□□□□ -1.14
CIITA-201ENST00000324288 APTXQ7Z2E3 356 aaKnown RBP7.93□□□□□ -1.14
CIITA-201ENST00000324288 COLGALT2Q8IYK4 626 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 CHST4Q8NCG5 386 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 TEX47Q8TBZ9 253 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 FAM151AQ8WW52 585 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 PNMA5Q96PV4 448 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 SLC38A2Q96QD8 506 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 ZNF350Q9GZX5 532 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 SPATA31E1Q6ZUB1 1445 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 MAGI3Q5TCQ9 1506 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 OR10H3O60404 316 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 SCN2BO60939 215 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 PI4KAP42356 2102 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 SNRPFP62306 86 aaKnown RBP7.93□□□□□ -1.14
CIITA-201ENST00000324288 HKDC1Q2TB90 917 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 WDR49Q8IV35 697 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 ENOPH1Q9UHY7 261 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 STX16-NPEPL1H3BU86 382 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 STX16O14662 325 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 OR7A10O76100 309 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 INO80DQ53TQ3 878 aaPredicted RBP7.93□□□□□ -1.14
CIITA-201ENST00000324288 GPR152Q8TDT2 470 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 TM6SF2Q9BZW4 377 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 EBF3Q9H4W6 596 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 FKBP14Q9NWM8 211 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 OAS3Q9Y6K5 1087 aaKnown RBP7.93□□□□□ -1.14
CIITA-201ENST00000324288 ZNF407Q9C0G0 2248 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 ZCCHC11Q5TAX3 1644 aaKnown RBP7.93□□□□□ -1.14
CIITA-201ENST00000324288 ALPK2Q86TB3 2170 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 CKAP5Q14008 2032 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 RBAK-RBAKDNI3L0D1 243 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 ERN1O75460 977 aaKnown RBP7.93□□□□□ -1.14
CIITA-201ENST00000324288 F9P00740 461 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 PGRP06401 933 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 PEX2P28328 305 aa7.93□□□□□ -1.14
CIITA-201ENST00000324288 CDKAL1Q5VV42 579 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms