RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 NUDCD1Q96RS6 583 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 MRPL57Q9BQC6 102 aaKnown RBP7.6□□□□□ -1.19
IFT88-201ENST00000319980 KLF16Q9BXK1 252 aaPredicted RBP7.6□□□□□ -1.19
IFT88-201ENST00000319980 MFSD1Q9H3U5 465 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 SORCS3Q9UPU3 1222 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 PCDHGC4Q9Y5F7 938 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 LOC100653049A0A140TA62 436 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 CCDC85CA6NKD9 419 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 H0Y3Z8 333 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 NEMP1O14524 444 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 INSIG1O15503 277 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 DCXO43602 365 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 KRT34O76011 436 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 ANP32DO95626 131 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 NDST3O95803 873 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 PDHA1P08559 390 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 EZRP15311 586 aaKnown RBP7.6□□□□□ -1.19
IFT88-201ENST00000319980 AOC1P19801 751 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 DNAJB1P25685 340 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 ITGB8P26012 769 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 RPL14P50914 215 aaKnown RBP7.6□□□□□ -1.19
IFT88-201ENST00000319980 CDKN2DP55273 166 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 RAB33AQ14088 237 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 TBCCQ15814 346 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 ARMC3Q5W041 872 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 TXNDC8Q6A555 127 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 EPGNQ6UW88 154 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 TMEM150AQ86TG1 271 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 SH3RF2Q8TEC5 729 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 PDCD6IPQ8WUM4 868 aaKnown RBP7.6□□□□□ -1.19
IFT88-201ENST00000319980 ANKRD49Q8WVL7 239 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 ZNF689Q96CS4 500 aaPredicted RBP7.6□□□□□ -1.19
IFT88-201ENST00000319980 LBHD1Q9BQE6 289 aaPredicted RBP7.6□□□□□ -1.19
IFT88-201ENST00000319980 WDR55Q9H6Y2 383 aaPredicted RBP7.6□□□□□ -1.19
IFT88-201ENST00000319980 CYP4F12Q9HCS2 524 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 SPG21Q9NZD8 308 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 HSFX1Q9UBD0 423 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 NKX1-2Q9UD57 310 aaPredicted RBP7.6□□□□□ -1.19
IFT88-201ENST00000319980 ZDHHC2Q9UIJ5 367 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 RAP2CQ9Y3L5 183 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 MTF2Q9Y483 593 aaPredicted RBP7.6□□□□□ -1.19
IFT88-201ENST00000319980 DOCK4Q8N1I0 1966 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 ABHD14A-ACY1A0A1B0GW23 586 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 CCDC162PA2VCL2 907 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 H0Y626 953 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 MATN2O00339 956 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 CD3EAPO15446 510 aaKnown RBP7.6□□□□□ -1.19
IFT88-201ENST00000319980 SNAP91O60641 907 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 CLTBP09497 229 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 MYL4P12829 197 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 EPHA3P29320 983 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 PMLP29590 882 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 PLK1P53350 603 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 EPHB3P54753 998 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 KHDC1Q4VXA5 237 aaKnown RBP7.6□□□□□ -1.19
IFT88-201ENST00000319980 FSCBQ5H9T9 825 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 GPR158Q5T848 1215 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 AGAP9Q5VTM2 703 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 ALG1LQ6GMV1 187 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 CXorf57Q6NSI4 855 aaKnown RBP7.6□□□□□ -1.19
IFT88-201ENST00000319980 MRNIPQ6NTE8 343 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 SETD3Q86TU7 594 aaPredicted RBP7.6□□□□□ -1.19
IFT88-201ENST00000319980 PIM3Q86V86 326 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 CARNMT1Q8N4J0 409 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 ARL14EPQ8N8R7 260 aaPredicted RBP7.6□□□□□ -1.19
IFT88-201ENST00000319980 TXNDC5Q8NBS9 432 aaKnown RBP7.6□□□□□ -1.19
IFT88-201ENST00000319980 TRMT2BQ96GJ1 504 aaKnown RBP7.6□□□□□ -1.19
IFT88-201ENST00000319980 SMIM14Q96QK8 99 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 OR52B2Q96RD2 323 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 TRIB3Q96RU7 358 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 THTPAQ9BU02 230 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 NUF2Q9BZD4 464 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 POMKQ9H5K3 350 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 SCUBE2Q9NQ36 999 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 TCF7L2Q9NQB0 619 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 NCKIPSDQ9NZQ3 722 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 TBC1D30Q9Y2I9 924 aa7.6□□□□□ -1.19
IFT88-201ENST00000319980 MEI4A8MW99 385 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 HDAC3O15379 428 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 TEX28O15482 410 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 PEX11AO75192 247 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 LTA4HP09960 611 aaKnown RBP7.59□□□□□ -1.19
IFT88-201ENST00000319980 PRSS56P0CW18 603 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 ACRP10323 421 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 HDCP19113 662 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 MZF1P28698 734 aaPredicted RBP7.59□□□□□ -1.19
IFT88-201ENST00000319980 KPNA2P52292 529 aaKnown RBP7.59□□□□□ -1.19
IFT88-201ENST00000319980 PRKAA2P54646 552 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 ZXDBP98169 803 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 PRKAA1Q13131 559 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 KPNB1Q14974 876 aaKnown RBP7.59□□□□□ -1.19
IFT88-201ENST00000319980 CYTH1Q15438 398 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 ACCSLQ4AC99 568 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 WASHC2DQ5SRD0 308 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 SEL1L3Q68CR1 1132 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 KLC3Q6P597 504 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 TRIM67Q6ZTA4 783 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 PHTF2Q8N3S3 785 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 OR4L1Q8NH43 312 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 WDR60Q8WVS4 1066 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms