RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 KYNUQ16719 465 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 RALGPS1Q5JS13 557 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 LYSMD3Q7Z3D4 306 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 TMC3Q7Z5M5 1100 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 DSG4Q86SJ6 1040 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 KLHDC8BQ8IXV7 354 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 UNC5BQ8IZJ1 945 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 HDDC3Q8N4P3 179 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 OR2T3Q8NH03 318 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 PYROXD1Q8WU10 500 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 UBLCP1Q8WVY7 318 aaPredicted RBP15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 MFSD3Q96ES6 412 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 ZNF641Q96N77 438 aaPredicted RBP15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 TPSD1Q9BZJ3 242 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 RSPH9Q9H1X1 276 aaPredicted RBP15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 CDC42EP4Q9H3Q1 356 aaKnown RBP15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 SLC2A6Q9UGQ3 507 aa15.47■□□□□ 0.07
PDLIM5-202ENST00000318007 A0A0J9YYE9 177 aa15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 NEMP1O14524 444 aa15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 NPC1O15118 1278 aa15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 CLDN7O95471 211 aa15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 TRBC1P01850 177 aa15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 DNTTP04053 509 aa15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 SSTR1P30872 391 aa15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 P2RY2P41231 377 aa15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 MAGEA3P43357 314 aa15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 MAGEA4P43358 317 aa15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 RPS14P62263 151 aaKnown RBP15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 SIGLEC14Q08ET2 396 aa15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 MTAPQ13126 283 aa15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 ZNF776Q68DI1 518 aaPredicted RBP15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 PLPP6Q8IY26 295 aa15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 PNPLA1Q8N8W4 532 aa15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 OR13C4Q8NGS5 318 aa15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 AENQ8WTP8 325 aaKnown RBP15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 ECHDC3Q96DC8 303 aa15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 SIPA1Q96FS4 1042 aa15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 MRGPRX1Q96LB2 322 aa15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 SIGLEC10Q96LC7 697 aa15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 OMDQ99983 421 aa15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 OSBPL1AQ9BXW6 950 aa15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 PCDH12Q9NPG4 1184 aa15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 B4GALT6Q9UBX8 382 aa15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 ARIH1Q9Y4X5 557 aaPredicted RBP15.46■□□□□ 0.07
PDLIM5-202ENST00000318007 SDR42E2A6NKP2 422 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 TIMP2P16035 220 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 NMBRP28336 390 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 DRD3P35462 400 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 GRIA4P48058 902 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 GRM3Q14832 879 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 CWF19L1Q69YN2 538 aaKnown RBP15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 EDAQ92838 391 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 MRRFQ96E11 262 aaKnown RBP15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 PPP1R16AQ96I34 528 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 GPR63Q9BZJ6 419 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 VPS37BQ9H9H4 285 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 PPANQ9NQ55 473 aaKnown RBP15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 FBXL12Q9NXK8 326 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 ZC3H7BQ9UGR2 993 aaKnown RBP15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 CD84Q9UIB8 345 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 RPS6KL1Q9Y6S9 549 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 UPK3BL1B0FP48 263 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 UPK3BL2E5RIL1 263 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 NDC80O14777 642 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 ACADMP11310 421 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 ADRB3P13945 408 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 GABRG2P18507 467 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 LHCGRP22888 699 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 ITGB7P26010 798 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 DNAJC21Q5F1R6 531 aaKnown RBP15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 LRRC66Q68CR7 880 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 BRAT1Q6PJG6 821 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 USP45Q70EL2 814 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 PALM2Q8IXS6 379 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 TMIEQ8NEW7 156 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 PPHLN1Q8NEY8 458 aaKnown RBP15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 KCNV2Q8TDN2 545 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 RUBCNQ92622 972 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 ZNF669Q96BR6 464 aaPredicted RBP15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 STAMBPL1Q96FJ0 436 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 IL22Q9GZX6 179 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 CD248Q9HCU0 757 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 COQ6Q9Y2Z9 468 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 ZNF711Q9Y462 761 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 TEX264Q9Y6I9 313 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 TECTAO75443 2155 aa15.45■□□□□ 0.06
PDLIM5-202ENST00000318007 SMAPO00193 183 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 GPR39O43194 453 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 EPOP01588 193 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 MLNP12872 115 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 PMS2P54278 862 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 RFLNAQ6ZTI6 216 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 ERN2Q76MJ5 926 aaKnown RBP15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 FRMD1Q8N878 549 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 TSTD1Q8NFU3 115 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 RLN3Q8WXF3 142 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 EID2BQ96D98 161 aa15.44■□□□□ 0.06
PDLIM5-202ENST00000318007 LRIG1Q96JA1 1093 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms