RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 CTNNBL1Q8WYA6 563 aaPredicted RBP12.76□□□□□ -0.37
CKS2-201ENST00000314355 ZNF578Q96N58 590 aaPredicted RBP12.76□□□□□ -0.37
CKS2-201ENST00000314355 TRIM7Q9C029 511 aa12.76□□□□□ -0.37
CKS2-201ENST00000314355 RCOR3Q9P2K3 495 aaPredicted RBP12.76□□□□□ -0.37
CKS2-201ENST00000314355 PADI4Q9UM07 663 aa12.76□□□□□ -0.37
CKS2-201ENST00000314355 PHTF1Q9UMS5 762 aa12.76□□□□□ -0.37
CKS2-201ENST00000314355 USP24Q9UPU5 2620 aa12.76□□□□□ -0.37
CKS2-201ENST00000314355 TMX2-CTNND1H3BSU7 103 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 YY2O15391 372 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 SOCS5O75159 536 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 CSO75390 466 aaKnown RBP12.75□□□□□ -0.37
CKS2-201ENST00000314355 TCEA3O75764 348 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 RECQL5O94762 991 aaPredicted RBP12.75□□□□□ -0.37
CKS2-201ENST00000314355 KRT7P08729 469 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 GIMD1P0DJR0 217 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 IGF2RP11717 2491 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 CA4P22748 312 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 CASP14P31944 242 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 MMP12P39900 470 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 EIF2S3P41091 472 aaKnown RBP12.75□□□□□ -0.37
CKS2-201ENST00000314355 MMP13P45452 471 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 SLC10A7Q0GE19 358 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 BIRC2Q13490 618 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 DPYSQ14117 519 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 SPIDRQ14159 915 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 PDK2Q15119 407 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 BROXQ5VW32 411 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 E4F1Q66K89 784 aaPredicted RBP12.75□□□□□ -0.37
CKS2-201ENST00000314355 HGSNATQ68CP4 663 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 LIPIQ6XZB0 460 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 RBM44Q6ZP01 1051 aaKnown RBP12.75□□□□□ -0.37
CKS2-201ENST00000314355 DPPA4Q7L190 304 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 ARHGAP12Q8IWW6 846 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 NIPA2Q8N8Q9 360 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 ZNF564Q8TBZ8 553 aaPredicted RBP12.75□□□□□ -0.37
CKS2-201ENST00000314355 CHD5Q8TDI0 1954 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 TSACCQ96A04 125 aaPredicted RBP12.75□□□□□ -0.37
CKS2-201ENST00000314355 CSPG4P5Q96PW8 444 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 NUDCD1Q96RS6 583 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 SYNDIG1Q9H7V2 258 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 KLF15Q9UIH9 416 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 RALYQ9UKM9 306 aaKnown RBP12.75□□□□□ -0.37
CKS2-201ENST00000314355 GPR34Q9UPC5 381 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 OR1A2Q9Y585 309 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 PCDHGC4Q9Y5F7 938 aa12.75□□□□□ -0.37
CKS2-201ENST00000314355 A0A087X0T9 212 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 A8MX80 341 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 AKR1B10O60218 316 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 BRINP1O60477 761 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 GCATO75600 419 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 CPP00450 1065 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 PRKCGP05129 697 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 CYP1A2P05177 515 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 FAM228BP0C875 321 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 MYF5P13349 255 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 IL1R2P27930 398 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 RGRP47804 291 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 EPHB1P54762 984 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 GABREP78334 506 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 ARMC12Q5T9G4 340 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 CDCP2Q5VXM1 449 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 DENND2CQ68D51 928 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 GUSBP11Q6P575 273 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 ARHGAP36Q6ZRI8 547 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 USP45Q70EL2 814 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 TAF8Q7Z7C8 310 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 NPWQ8N729 165 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 ARL10Q8N8L6 244 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 ZNF248Q8NDW4 579 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 OR8K1Q8NGG5 319 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 OR56A4Q8NGH8 313 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 ECHDC3Q96DC8 303 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 CCDC97Q96F63 343 aaPredicted RBP12.74□□□□□ -0.37
CKS2-201ENST00000314355 ZNF830Q96NB3 372 aaPredicted RBP12.74□□□□□ -0.37
CKS2-201ENST00000314355 LGMNQ99538 433 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 LRRC61Q9BV99 259 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 BOCQ9BWV1 1114 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 MAK16Q9BXY0 300 aaKnown RBP12.74□□□□□ -0.37
CKS2-201ENST00000314355 POLR1EQ9GZS1 481 aaKnown RBP12.74□□□□□ -0.37
CKS2-201ENST00000314355 WDR26Q9H7D7 661 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 POLR1BQ9H9Y6 1135 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 PCDH18Q9HCL0 1135 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 PHPT1Q9NRX4 125 aaPredicted RBP12.74□□□□□ -0.37
CKS2-201ENST00000314355 THSD1Q9NS62 852 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 UVRAGQ9P2Y5 699 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 ACACAQ13085 2346 aa12.74□□□□□ -0.37
CKS2-201ENST00000314355 ARID1BQ8NFD5 2236 aaPredicted RBP12.74□□□□□ -0.37
CKS2-201ENST00000314355 GOLGA6CA6NDK9 693 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 GOLGA6BA6NDN3 693 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 TRAFD1O14545 582 aaPredicted RBP12.73□□□□□ -0.37
CKS2-201ENST00000314355 TNFRSF10CO14798 259 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 MAFKO60675 156 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 HOXC4P09017 264 aaPredicted RBP12.73□□□□□ -0.37
CKS2-201ENST00000314355 GOLGA6DP0CG33 693 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 MX2P20592 715 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 VIPR1P32241 457 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 GJC1P36383 396 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 PBX1P40424 430 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 LSSP48449 732 aa12.73□□□□□ -0.37
CKS2-201ENST00000314355 PCBP4P57723 403 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms