RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 FNIP1Q8TF40 1166 aa7.83□□□□□ -1.16
SCN9A-201ENST00000303354 REPS1Q96D71 796 aa7.83□□□□□ -1.16
SCN9A-201ENST00000303354 PCED1BQ96HM7 432 aa7.83□□□□□ -1.16
SCN9A-201ENST00000303354 ROPN1BQ9BZX4 212 aaPredicted RBP7.83□□□□□ -1.16
SCN9A-201ENST00000303354 C6orf62Q9GZU0 229 aaPredicted RBP7.83□□□□□ -1.16
SCN9A-201ENST00000303354 ROPN1Q9HAT0 212 aaPredicted RBP7.83□□□□□ -1.16
SCN9A-201ENST00000303354 REREQ9P2R6 1566 aa7.83□□□□□ -1.16
SCN9A-201ENST00000303354 POLR3HQ9Y535 204 aaPredicted RBP7.83□□□□□ -1.16
SCN9A-201ENST00000303354 IQGAP3Q86VI3 1631 aa7.83□□□□□ -1.16
SCN9A-201ENST00000303354 FOXO6A8MYZ6 492 aa7.83□□□□□ -1.16
SCN9A-201ENST00000303354 AP5Z1O43299 807 aa7.83□□□□□ -1.16
SCN9A-201ENST00000303354 RBMXL2O75526 392 aaKnown RBP7.83□□□□□ -1.16
SCN9A-201ENST00000303354 NQO1P15559 274 aaKnown RBP7.83□□□□□ -1.16
SCN9A-201ENST00000303354 MYBPC2Q14324 1141 aa7.83□□□□□ -1.16
SCN9A-201ENST00000303354 TMEM220Q6QAJ8 160 aa7.83□□□□□ -1.16
SCN9A-201ENST00000303354 BEND5Q7L4P6 421 aa7.83□□□□□ -1.16
SCN9A-201ENST00000303354 TMEM192Q8IY95 271 aa7.83□□□□□ -1.16
SCN9A-201ENST00000303354 ARHGAP39Q9C0H5 1083 aa7.83□□□□□ -1.16
SCN9A-201ENST00000303354 RNF121Q9H920 327 aa7.83□□□□□ -1.16
SCN9A-201ENST00000303354 SPATA2Q9UM82 520 aa7.83□□□□□ -1.16
SCN9A-201ENST00000303354 E9PAM4 449 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 SRP54P61011 504 aaKnown RBP7.82□□□□□ -1.16
SCN9A-201ENST00000303354 C1QBPQ07021 282 aaKnown RBP7.82□□□□□ -1.16
SCN9A-201ENST00000303354 ZNF460Q14592 562 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 TEAD4Q15561 434 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 TEAD2Q15562 447 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 ARMC4Q5T2S8 1044 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 ANKRD52Q8NB46 1076 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 OR4L1Q8NH43 312 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 BRI3BPQ8WY22 251 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 NSMCE2Q96MF7 247 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 CDRT15Q96T59 188 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 DLGAP2Q9P1A6 1054 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 EGFL7Q9UHF1 273 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 LRCH1Q9Y2L9 728 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 ARIH1Q9Y4X5 557 aaPredicted RBP7.82□□□□□ -1.16
SCN9A-201ENST00000303354 TSPAN1O60635 241 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 SHBGP04278 402 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 GKP32189 559 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 SERPINB10P48595 397 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 DGCR6Q14129 220 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 AGBL2Q5U5Z8 902 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 SLC8B1Q6J4K2 584 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 FAM45BPQ6NSW5 357 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 RPTNQ6XPR3 784 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 PLPPR4Q7Z2D5 763 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 NPAS4Q8IUM7 802 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 ARMC8Q8IUR7 673 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 FAM45AQ8TCE6 357 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 SH3RF2Q8TEC5 729 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 POLMQ9NP87 494 aaPredicted RBP7.82□□□□□ -1.16
SCN9A-201ENST00000303354 RAI2Q9Y5P3 530 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 MYBPHLA2RUH7 354 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 MRASO14807 208 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 EIF3HO15372 352 aaKnown RBP eCLIP7.82□□□□□ -1.161e-6■■■□□ 19
SCN9A-201ENST00000303354 CSKP41240 450 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 GRM5P41594 1212 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 PCID2Q5JVF3 399 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 UBXN11Q5T124 520 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 ADPRHL2Q9NX46 363 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 TRHDEQ9UKU6 1024 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 ASTN1O14525 1302 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 A0A075B6Q4 140 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 NFATC1O95644 943 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 CRABP2P29373 138 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 GSTM5P46439 218 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 IDH2P48735 452 aaKnown RBP7.82□□□□□ -1.16
SCN9A-201ENST00000303354 ACLYP53396 1101 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 NLGN4XQ8N0W4 816 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 ZNF671Q8TAW3 534 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 C12orf66Q96MD2 445 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 C12orf65Q9H3J6 166 aaKnown RBP7.82□□□□□ -1.16
SCN9A-201ENST00000303354 RPRD1BQ9NQG5 326 aaKnown RBP7.82□□□□□ -1.16
SCN9A-201ENST00000303354 TNFRSF10BO14763 440 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 LYPLA1O75608 230 aaPredicted RBP7.82□□□□□ -1.16
SCN9A-201ENST00000303354 IFNA14P01570 189 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 TYRP1P17643 537 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 TACR2P21452 398 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 ITGA3P26006 1051 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 RPL10P27635 214 aaKnown RBP7.82□□□□□ -1.16
SCN9A-201ENST00000303354 SSR2P43308 183 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 TUSC3Q13454 348 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 TCF7L2Q9NQB0 619 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 AK5Q9Y6K8 562 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 FRMPD4Q14CM0 1322 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 INO80Q9ULG1 1556 aaPredicted RBP7.82□□□□□ -1.16
SCN9A-201ENST00000303354 INPPL1O15357 1258 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 SLC26A4O43511 780 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 CBLP22681 906 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 DUSP28Q4G0W2 176 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 PLEKHG4Q58EX7 1191 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 SUGP1Q8IWZ8 645 aaKnown RBP7.82□□□□□ -1.16
SCN9A-201ENST00000303354 EID3Q8N140 333 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 FAM46DQ8NEK8 389 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 AZIN2Q96A70 460 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 MYCBPQ99417 103 aaPredicted RBP7.82□□□□□ -1.16
SCN9A-201ENST00000303354 DUSP16Q9BY84 665 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 AGO3Q9H9G7 860 aaKnown RBP7.82□□□□□ -1.16
SCN9A-201ENST00000303354 RNF186Q9NXI6 227 aa7.82□□□□□ -1.16
SCN9A-201ENST00000303354 MAP4K5Q9Y4K4 846 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms