RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 USP50Q70EL3 339 aaPredicted RBP13.52□□□□□ -0.25
CTDP1-202ENST00000299543 LRRTM3Q86VH5 581 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 TMEM151AQ8N4L1 468 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 GTF3C2Q8WUA4 911 aaPredicted RBP13.52□□□□□ -0.25
CTDP1-202ENST00000299543 EME1Q96AY2 570 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 PTPN18Q99952 460 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 ABI2Q9NYB9 513 aaPredicted RBP13.52□□□□□ -0.25
CTDP1-202ENST00000299543 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.52□□□□□ -0.25
CTDP1-202ENST00000299543 GNEQ9Y223 722 aaKnown RBP13.52□□□□□ -0.25
CTDP1-202ENST00000299543 ANKRD6Q9Y2G4 727 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 COQ6Q9Y2Z9 468 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 PDE4DIPQ5VU43 2346 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 CRTAMO95727 393 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 PIRTP0C851 137 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 CPB1P15086 417 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 PAMP19021 973 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 CPT1AP50416 773 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 WNT3AP56704 352 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 FSCN1Q16658 493 aaKnown RBP13.52□□□□□ -0.25
CTDP1-202ENST00000299543 XKR4Q5GH76 650 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 THOC7Q6I9Y2 204 aaKnown RBP13.52□□□□□ -0.25
CTDP1-202ENST00000299543 ADGRG6Q86SQ4 1221 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 OR9I1Q8NGQ6 314 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 THAP11Q96EK4 314 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 ARPC5LQ9BPX5 153 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 SLC39A3Q9BRY0 314 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 ALG9Q9H6U8 611 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 NSMCE4AQ9NXX6 385 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 EBF1Q9UH73 591 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 IPO11Q9UI26 975 aaKnown RBP13.52□□□□□ -0.25
CTDP1-202ENST00000299543 DMTF1Q9Y222 760 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 AP4B1Q9Y6B7 739 aa13.52□□□□□ -0.25
CTDP1-202ENST00000299543 HCAR3P49019 387 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 PRAMEP78395 509 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 FAM83EQ2M2I3 478 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 BNIPLQ7Z465 357 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 SIX5Q8N196 739 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 PDCD6IPQ8WUM4 868 aaKnown RBP13.51□□□□□ -0.25
CTDP1-202ENST00000299543 PARK7Q99497 189 aaKnown RBP13.51□□□□□ -0.25
CTDP1-202ENST00000299543 CCDC28BQ9BUN5 200 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 ZFYVE28Q9HCC9 887 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 PRDX6P30041 224 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 CD86P42081 329 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 AIF1P55008 147 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 GEMP55040 296 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 ZNF423Q2M1K9 1284 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 KDM1BQ8NB78 822 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 OR52K2Q8NGK3 314 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 ISL2Q96A47 359 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 TIMMDC1Q9NPL8 285 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 NDUFA13Q9P0J0 144 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 TCAF1Q9Y4C2 921 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 A0A0G2JMZ2 1700 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 LRRC37A2A6NM11 1700 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 MYADML2A6NDP7 307 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 HHLA1C9JL84 531 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 SEC24DO94855 1032 aaPredicted RBP13.51□□□□□ -0.25
CTDP1-202ENST00000299543 ITGB1P05556 798 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 ARNTP27540 789 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 CCR1P32246 355 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 ARPP19P56211 112 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 PTPRCAPQ14761 206 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 PCBP1Q15365 356 aaKnown RBP eCLIP13.51□□□□□ -0.25
CTDP1-202ENST00000299543 TSTD2Q5T7W7 516 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 POTEHQ6S545 545 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 AGMOQ6ZNB7 445 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 MIB1Q86YT6 1006 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 LILRA2Q8N149 483 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 TMEM86AQ8N2M4 240 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 GABPB2Q8TAK5 448 aaPredicted RBP13.51□□□□□ -0.25
CTDP1-202ENST00000299543 NEURL2Q9BR09 285 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 Q9H521 79 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 CATSPERBQ9H7T0 1116 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 SPON1Q9HCB6 807 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 ZBTB26Q9HCK0 441 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 FBRSL1Q9HCM7 1045 aaKnown RBP13.51□□□□□ -0.25
CTDP1-202ENST00000299543 TNFRSF12AQ9NP84 129 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 VTI1BQ9UEU0 232 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 PRPF19Q9UMS4 504 aaKnown RBP13.51□□□□□ -0.25
CTDP1-202ENST00000299543 SNX13Q9Y5W8 968 aa13.51□□□□□ -0.25
CTDP1-202ENST00000299543 OTOFQ9HC10 1997 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 UBDO15205 165 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 MAFKO60675 156 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 HOXD8P13378 290 aaPredicted RBP13.5□□□□□ -0.25
CTDP1-202ENST00000299543 YWHAQP27348 245 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 CD52P31358 61 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 HADHAP40939 763 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 PSME3P61289 254 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 CTBSQ01459 385 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 FASTKQ14296 549 aaKnown RBP13.5□□□□□ -0.25
CTDP1-202ENST00000299543 KIF19Q2TAC6 998 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 OVOS1Q6IE37 1185 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 LIMS2Q7Z4I7 341 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 SPATA2LQ8IUW3 424 aaPredicted RBP13.5□□□□□ -0.25
CTDP1-202ENST00000299543 ARHGAP12Q8IWW6 846 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 KLHL32Q96NJ5 620 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 OLFM1Q99784 485 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 EPS15L1Q9UBC2 864 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 GIMAP2Q9UG22 337 aa13.5□□□□□ -0.25
CTDP1-202ENST00000299543 KCTD3Q9Y597 815 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms