RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 DNAJB13P59910 316 aa13.67□□□□□ -0.22
CDH8-201ENST00000299345 EIF4EBP2Q13542 120 aaPredicted RBP13.67□□□□□ -0.22
CDH8-201ENST00000299345 TECRLQ5HYJ1 363 aa13.67□□□□□ -0.22
CDH8-201ENST00000299345 CLLU1OSQ5K130 101 aa13.67□□□□□ -0.22
CDH8-201ENST00000299345 PQLC1Q8N2U9 271 aa13.67□□□□□ -0.22
CDH8-201ENST00000299345 TRAF6Q9Y4K3 522 aa13.67□□□□□ -0.22
CDH8-201ENST00000299345 ATP6AP2A0A1C7CYW4 349 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 TARM1B6A8C7 271 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 ATP6AP2O75787 350 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 PAPSS2O95340 614 aaPredicted RBP13.66□□□□□ -0.22
CDH8-201ENST00000299345 XRCC1P18887 633 aaPredicted RBP13.66□□□□□ -0.22
CDH8-201ENST00000299345 HLA-DPA1P20036 260 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 ARSDP51689 593 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 POLE2P56282 527 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 DUSP4Q13115 394 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 RNF220Q5VTB9 566 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 DDIASQ8IXT1 998 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 DNAJC1Q96KC8 554 aaKnown RBP13.66□□□□□ -0.22
CDH8-201ENST00000299345 MFSD1Q9H3U5 465 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 IGSF5Q9NSI5 407 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 SDHDO14521 159 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 GIPC1O14908 333 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 CD3EAPO15446 510 aaKnown RBP13.66□□□□□ -0.22
CDH8-201ENST00000299345 B4GALT3O60512 393 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 FGF1P05230 155 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 CDH13P55290 713 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 HERC3Q15034 1050 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 AFMIDQ63HM1 303 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 ZFP1Q6P2D0 407 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 KLHDC8BQ8IXV7 354 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 COLGALT2Q8IYK4 626 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 GCNAQ96QF7 691 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.66□□□□□ -0.22
CDH8-201ENST00000299345 STX16-NPEPL1H3BU86 382 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 RHOBTB1O94844 696 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 SCNN1BP51168 640 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 SULT2A1Q06520 285 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 SPNS2Q8IVW8 549 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 CPSF7Q8N684 471 aaKnown RBP13.66□□□□□ -0.22
CDH8-201ENST00000299345 RANBP9Q96S59 729 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 CINPQ9BW66 212 aaPredicted RBP13.66□□□□□ -0.22
CDH8-201ENST00000299345 C6orf203Q9P0P8 240 aaPredicted RBP13.66□□□□□ -0.22
CDH8-201ENST00000299345 SQORQ9Y6N5 450 aa13.66□□□□□ -0.22
CDH8-201ENST00000299345 TTC3P53804 2025 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 NDUFS3O75489 264 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 MAGEA11P43364 429 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 SLC11A2P49281 568 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 KPNA1P52294 538 aaPredicted RBP13.65□□□□□ -0.22
CDH8-201ENST00000299345 AQP4P55087 323 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 PSME3P61289 254 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 XIAPP98170 497 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 PFKPQ01813 784 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 BTKQ06187 659 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 SFT2D3Q587I9 215 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 PIM3Q86V86 326 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 OR13J1Q8NGT2 312 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 SPPL2BQ8TCT7 592 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 TRMOQ9BU70 441 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 COPS7BQ9H9Q2 264 aaPredicted RBP13.65□□□□□ -0.22
CDH8-201ENST00000299345 PRDM5Q9NQX1 630 aaPredicted RBP13.65□□□□□ -0.22
CDH8-201ENST00000299345 STARD7Q9NQZ5 370 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 CATSPERZQ9NTU4 200 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 MARCH4Q9P2E8 410 aaPredicted RBP13.65□□□□□ -0.22
CDH8-201ENST00000299345 PDCD11Q14690 1871 aaKnown RBP13.65□□□□□ -0.22
CDH8-201ENST00000299345 NT5C1B-RDH14C9J2C7 533 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 UQCRBP14927 111 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 TACR2P21452 398 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 KCNA5P22460 613 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 DSC1Q08554 894 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 SQLEQ14534 574 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 CLEC6AQ6EIG7 209 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 RTN4RL1Q86UN2 441 aaPredicted RBP13.65□□□□□ -0.22
CDH8-201ENST00000299345 KBTBD6Q86V97 674 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 CATSPER1Q8NEC5 780 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 ANKRD49Q8WVL7 239 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 ARL5AQ9Y689 179 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 CAPN8A6NHC0 703 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 PFDN6O15212 129 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 GOT2P00505 430 aaKnown RBP13.65□□□□□ -0.22
CDH8-201ENST00000299345 HOXB8P17481 243 aaPredicted RBP13.65□□□□□ -0.22
CDH8-201ENST00000299345 SATB1Q01826 763 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 SERINC3Q13530 473 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 PTPRCAPQ14761 206 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 PDSS2Q86YH6 399 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 PTGR2Q8N8N7 351 aaPredicted RBP13.65□□□□□ -0.22
CDH8-201ENST00000299345 KLHDC9Q8NEP7 349 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 CENPKQ9BS16 269 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 CCSER2Q9H7U1 834 aa13.65□□□□□ -0.22
CDH8-201ENST00000299345 CRTAMO95727 393 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 S1PR4O95977 384 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 VCLP18206 1134 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 PFKFB4Q16877 469 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 KIAA1841Q6NSI8 718 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 GALNT4Q8N4A0 578 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 OR4L1Q8NH43 312 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 GATA6Q92908 595 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 MID1IP1Q9NPA3 183 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 SEPT3Q9UH03 358 aa13.64□□□□□ -0.23
CDH8-201ENST00000299345 ZNF638Q14966 1978 aaKnown RBP13.64□□□□□ -0.23
CDH8-201ENST00000299345 CCDC162PA2VCL2 907 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms