RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 PAGE2BQ5JRK9 111 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 PTCD2Q8WV60 388 aaKnown RBP5.58□□□□□ -1.52
CPSF2-201ENST00000298875 CIDECQ96AQ7 238 aaPredicted RBP5.58□□□□□ -1.52
CPSF2-201ENST00000298875 KLHL32Q96NJ5 620 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 SERPINB11Q96P15 392 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 C1QTNF7Q9BXJ2 289 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 TMPRSS4Q9NRS4 437 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 POLR3HQ9Y535 204 aaPredicted RBP5.58□□□□□ -1.52
CPSF2-201ENST00000298875 KRT36O76013 467 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 SERPINA4P29622 427 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 GRIA4P48058 902 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 PPIL2Q13356 520 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 PTPAQ15257 358 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 ARMC12Q5T9G4 340 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 LLGL2Q6P1M3 1020 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 PLEKHH3Q7Z736 793 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 GIPC3Q8TF64 312 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 SELENOMQ8WWX9 145 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 HTRA1Q92743 480 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 FCRL4Q96PJ5 515 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 EXO5Q9H790 373 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 CLK4Q9HAZ1 481 aaKnown RBP5.58□□□□□ -1.52
CPSF2-201ENST00000298875 SETD4Q9NVD3 440 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 DNAJC11Q9NVH1 559 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 PDPK1O15530 556 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 SGTAO43765 313 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 CELF2O95319 508 aaKnown RBP5.58□□□□□ -1.52
CPSF2-201ENST00000298875 POMCP01189 267 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 TSPAN8P19075 237 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 PSMB4P28070 264 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 YAP1P46937 504 aaKnown RBP5.58□□□□□ -1.52
CPSF2-201ENST00000298875 PITRM1Q5JRX3 1037 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 FAM171A1Q5VUB5 890 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 ZNF354BQ96LW1 612 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 ACAT2Q9BWD1 397 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 RGSL1A5PLK6 1076 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 TRDMT1O14717 391 aaKnown RBP5.58□□□□□ -1.52
CPSF2-201ENST00000298875 CLK3P49761 638 aaKnown RBP5.58□□□□□ -1.52
CPSF2-201ENST00000298875 ACSM2AQ08AH3 577 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 IL18R1Q13478 541 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 PGM5Q15124 567 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 CDKAL1Q5VV42 579 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 ACSM2BQ68CK6 577 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 OSMRQ99650 979 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 TKTL2Q9H0I9 626 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 PACSIN3Q9UKS6 424 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.58□□□□□ -1.52
CPSF2-201ENST00000298875 IRAK3Q9Y616 596 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 TRMUO75648 421 aaKnown RBP5.58□□□□□ -1.52
CPSF2-201ENST00000298875 MLYCDO95822 493 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 SERPINA1P01009 418 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 YBX3P16989 372 aaKnown RBP eCLIP5.58□□□□□ -1.52
CPSF2-201ENST00000298875 PGDP52209 483 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 AAGABQ6PD74 315 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 GALNTL5Q7Z4T8 443 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 C12orf56Q8IXR9 622 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 STK40Q8N2I9 435 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 GPR156Q8NFN8 814 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 SLC2A14Q8TDB8 520 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 TCEAL3Q969E4 200 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 PHB2Q99623 299 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 CHST7Q9NS84 486 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 TNPO3Q9Y5L0 923 aaKnown RBP5.58□□□□□ -1.52
CPSF2-201ENST00000298875 DGKBQ9Y6T7 804 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 DNAJA2O60884 412 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 RECQL5O94762 991 aaPredicted RBP5.58□□□□□ -1.52
CPSF2-201ENST00000298875 RARAP10276 462 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 UGT2B15P54855 530 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 POLR2LP62875 67 aaKnown RBP5.58□□□□□ -1.52
CPSF2-201ENST00000298875 SRSF11Q05519 484 aaKnown RBP5.58□□□□□ -1.52
CPSF2-201ENST00000298875 INTS11Q5TA45 600 aaKnown RBP5.58□□□□□ -1.52
CPSF2-201ENST00000298875 CCDC28AQ8IWP9 274 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 GMCL1P1Q8NEA9 526 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 AKAP1Q92667 903 aaKnown RBP eCLIP5.58□□□□□ -1.52
CPSF2-201ENST00000298875 MTMR8Q96EF0 704 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 CCDC115Q96NT0 180 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 RAB23Q9ULC3 237 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 PCDHB5Q9Y5E4 795 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 GMFGO60234 142 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 OR10H3O60404 316 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 TOP3BO95985 862 aaKnown RBP5.58□□□□□ -1.52
CPSF2-201ENST00000298875 KLRC2P26717 231 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 SREBF1P36956 1147 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 PFKPQ01813 784 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 FIGNQ5HY92 759 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 MEIOBQ8N635 442 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 DRAXINQ8NBI3 349 aaPredicted RBP5.58□□□□□ -1.52
CPSF2-201ENST00000298875 CXorf40AQ8TE69 158 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 TRNAU1APQ9NX07 287 aaKnown RBP5.58□□□□□ -1.52
CPSF2-201ENST00000298875 MORF4L1Q9UBU8 362 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 LEF1Q9UJU2 399 aaPredicted RBP5.58□□□□□ -1.52
CPSF2-201ENST00000298875 NCKAP1Q9Y2A7 1128 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 MAGEC1O60732 1142 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 RPL38P63173 70 aaKnown RBP5.58□□□□□ -1.52
CPSF2-201ENST00000298875 RRP1BQ14684 758 aaKnown RBP5.58□□□□□ -1.52
CPSF2-201ENST00000298875 SWI5Q1ZZU3 235 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 MTX3Q5HYI7 312 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 TNS4Q8IZW8 715 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 LINC00116Q8NCU8 138 aa5.58□□□□□ -1.52
CPSF2-201ENST00000298875 AGAP11Q8TF27 550 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms