RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 TPBGLP0DKB5 382 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 MYL4P12829 197 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 GCKP35557 465 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 MAGEA12P43365 314 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 CDKN1CP49918 316 aaPredicted RBP9.35□□□□□ -0.91
PRDM9-201ENST00000296682 PTPRNQ16849 979 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 PITRM1Q5JRX3 1037 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 LIPMQ5VYY2 423 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 LPCAT4Q643R3 524 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 CYP2R1Q6VVX0 501 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.35□□□□□ -0.91
PRDM9-201ENST00000296682 TRPC4APQ8TEL6 797 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 OLFM1Q99784 485 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 YIPF3Q9GZM5 350 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 EBF2Q9HAK2 575 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 SCML2Q9UQR0 700 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 TIMM22Q9Y584 194 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 PTGDR2Q9Y5Y4 395 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 RAD54BQ9Y620 910 aa9.35□□□□□ -0.91
PRDM9-201ENST00000296682 TYW5A2RUC4 315 aaKnown RBP9.34□□□□□ -0.91
PRDM9-201ENST00000296682 MUSKO15146 869 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 RTN3O95197 1032 aaPredicted RBP9.34□□□□□ -0.91
PRDM9-201ENST00000296682 CYP11A1P05108 521 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 ATP5BP06576 529 aaKnown RBP9.34□□□□□ -0.91
PRDM9-201ENST00000296682 KCNA5P22460 613 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 RHOAP61586 193 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 KLF10Q13118 480 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 TSTD2Q5T7W7 516 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 ZNF697Q5TEC3 545 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 CALML6Q8TD86 181 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 ANKRD49Q8WVL7 239 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 YME1L1Q96TA2 773 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 MID1IP1Q9NPA3 183 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 DONSONQ9NYP3 566 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 HACD3Q9P035 362 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 ARHGAP26Q9UNA1 814 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 PPP6CO00743 305 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 CLGNO14967 610 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 HDAC3O15379 428 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 CD3EAPO15446 510 aaKnown RBP9.34□□□□□ -0.91
PRDM9-201ENST00000296682 CACNG3O60359 315 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 COX4I1P13073 169 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 AP2B1P63010 937 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 ECT2LQ008S8 904 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 GNA12Q03113 381 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 DNAL1Q4LDG9 190 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 MRNIPQ6NTE8 343 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 GK5Q6ZS86 529 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 ANKS3Q6ZW76 656 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 BEND5Q7L4P6 421 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 PTGR2Q8N8N7 351 aaPredicted RBP9.34□□□□□ -0.91
PRDM9-201ENST00000296682 MYLIPQ8WY64 445 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 TUBGCP3Q96CW5 907 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 SORT1Q99523 831 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 TNKS2Q9H2K2 1166 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 NOL6Q9H6R4 1146 aaKnown RBP9.34□□□□□ -0.91
PRDM9-201ENST00000296682 FBRSL1Q9HCM7 1045 aaKnown RBP9.34□□□□□ -0.91
PRDM9-201ENST00000296682 DLGAP2Q9P1A6 1054 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 K7ERQ8 282 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 OAZ2O95190 189 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 RGRP47804 291 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 MRPS22P82650 360 aaKnown RBP9.34□□□□□ -0.91
PRDM9-201ENST00000296682 CYP4F8P98187 520 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 DLG1Q12959 904 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 PPP1R3AQ16821 1122 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 USP41Q3LFD5 358 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 FUT11Q495W5 492 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 KCTD11Q693B1 232 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 TLDC1Q6P9B6 456 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 IZUMO2Q6UXV1 221 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 RAB44Q7Z6P3 723 aaPredicted RBP9.34□□□□□ -0.91
PRDM9-201ENST00000296682 AFAP1L2Q8N4X5 818 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 TXNDC5Q8NBS9 432 aaKnown RBP9.34□□□□□ -0.91
PRDM9-201ENST00000296682 SPPL2BQ8TCT7 592 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 SH3RF2Q8TEC5 729 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 SPDL1Q96EA4 605 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 KIFC1Q9BW19 673 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 TRIM8Q9BZR9 551 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.34□□□□□ -0.91
PRDM9-201ENST00000296682 TLR9Q9NR96 1032 aa9.34□□□□□ -0.91
PRDM9-201ENST00000296682 GBF1Q92538 1859 aa9.34□□□□□ -0.92
PRDM9-201ENST00000296682 G3V2L1 256 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 H7C4K7 107 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 UBXN8O00124 270 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 AP3B1O00203 1094 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 BTN3A1O00481 513 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 ACSL4O60488 711 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 SNX2O60749 519 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 GSRP00390 522 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 ALPIP09923 528 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 PIK3CGP48736 1102 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 PRKAA1Q13131 559 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 CYLC2Q14093 348 aaPredicted RBP9.33□□□□□ -0.92
PRDM9-201ENST00000296682 TRIP4Q15650 581 aaPredicted RBP9.33□□□□□ -0.92
PRDM9-201ENST00000296682 RBBP7Q16576 425 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 DENND5AQ6IQ26 1287 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 RANBP10Q6VN20 620 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 MAVSQ7Z434 540 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 NPAS4Q8IUM7 802 aa9.33□□□□□ -0.92
PRDM9-201ENST00000296682 MFSD6LQ8IWD5 586 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms