RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 TCN1P20061 433 aaPredicted RBP11.82□□□□□ -0.52
RHO-201ENST00000296271 CRABP2P29373 138 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 HTR7P34969 479 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 SCNN1BP51168 640 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 PRKAA1Q13131 559 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 ZNF235Q14590 738 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 ISLR2Q6UXK2 745 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 GK5Q6ZS86 529 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 FBXO22Q8NEZ5 403 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 HMGCLL1Q8TB92 370 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 CMTM5Q96DZ9 223 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 MYCBPQ99417 103 aaPredicted RBP11.82□□□□□ -0.52
RHO-201ENST00000296271 MRPL57Q9BQC6 102 aaKnown RBP11.82□□□□□ -0.52
RHO-201ENST00000296271 FAM96AQ9H5X1 160 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 MRM3Q9HC36 420 aaKnown RBP11.82□□□□□ -0.52
RHO-201ENST00000296271 CLIC5Q9NZA1 410 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 NCKIPSDQ9NZQ3 722 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 LRFN2Q9ULH4 789 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 SORCS3Q9UPU3 1222 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 VWA7Q9Y334 891 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 PCDHGC4Q9Y5F7 938 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 CHD7Q9P2D1 2997 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 C2orf78A6NCI8 922 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 MOXD2PA6NHM9 499 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 C9JVG2 144 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 H3BMM5 538 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 PRAMEF11O60813 436 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 ENO3P13929 434 aaPredicted RBP11.82□□□□□ -0.52
RHO-201ENST00000296271 DNAJB2P25686 324 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 HADHAP40939 763 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 POU4F1Q01851 419 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 BTKQ06187 659 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 IL10RBQ08334 325 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 IZUMO2Q6UXV1 221 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 ACTRT2Q8TDY3 377 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 AUTS2Q8WXX7 1259 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 TADA1Q96BN2 335 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 IFT43Q96FT9 208 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 UBXN10Q96LJ8 280 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 NSUN5Q96P11 429 aaKnown RBP11.82□□□□□ -0.52
RHO-201ENST00000296271 NACA2Q9H009 215 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 PDFQ9HBH1 243 aa11.82□□□□□ -0.52
RHO-201ENST00000296271 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.82□□□□□ -0.52
RHO-201ENST00000296271 TSR3Q9UJK0 312 aaKnown RBP11.82□□□□□ -0.52
RHO-201ENST00000296271 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.82□□□□□ -0.52
RHO-201ENST00000296271 H3BNC9 293 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 COCHO43405 550 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 THOP1P52888 689 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 CYHR1Q6ZMK1 362 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 ISCA2Q86U28 154 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 FAM126BQ8IXS8 530 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 OR9I1Q8NGQ6 314 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 RDH11Q8TC12 318 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 PTCD2Q8WV60 388 aaKnown RBP11.81□□□□□ -0.52
RHO-201ENST00000296271 CDRT15Q96T59 188 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 TTPALQ9BTX7 342 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 PRKD2Q9BZL6 878 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 ZNF385DQ9H6B1 395 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 S100A14Q9HCY8 104 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 HMX1Q9NP08 348 aaPredicted RBP11.81□□□□□ -0.52
RHO-201ENST00000296271 BPIFA1Q9NP55 256 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 GMPR2Q9P2T1 348 aaKnown RBP11.81□□□□□ -0.52
RHO-201ENST00000296271 ARHGAP26Q9UNA1 814 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 CDYLQ9Y232 598 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 FAM50BQ9Y247 325 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 OR6C75A6NL08 312 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 F5H5T6 163 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 F8W8V4 182 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 CBX4O00257 560 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 CCNT2O60583 730 aaKnown RBP11.81□□□□□ -0.52
RHO-201ENST00000296271 SNAP91O60641 907 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 ZNF189O75820 626 aaPredicted RBP11.81□□□□□ -0.52
RHO-201ENST00000296271 APOA4P06727 396 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 LTA4HP09960 611 aaKnown RBP11.81□□□□□ -0.52
RHO-201ENST00000296271 XRCC1P18887 633 aaPredicted RBP11.81□□□□□ -0.52
RHO-201ENST00000296271 PAX7P23759 505 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 ATP5F1P24539 256 aaPredicted RBP11.81□□□□□ -0.52
RHO-201ENST00000296271 FOXA1P55317 472 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 NME5P56597 212 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 MS4A2Q01362 244 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 PFKPQ01813 784 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 BLMHQ13867 455 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 DSELQ8IZU8 1212 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 CRIPAKQ8N1N5 446 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 ARHGAP18Q8N392 663 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 PHC3Q8NDX5 983 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 SREK1Q8WXA9 508 aaKnown RBP11.81□□□□□ -0.52
RHO-201ENST00000296271 CCDC97Q96F63 343 aaPredicted RBP11.81□□□□□ -0.52
RHO-201ENST00000296271 C3orf30Q96M34 536 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 SLC22A12Q96S37 553 aa11.81□□□□□ -0.52
RHO-201ENST00000296271 POLR1EQ9GZS1 481 aaKnown RBP11.81□□□□□ -0.52
RHO-201ENST00000296271 POLR3BQ9NW08 1133 aaPredicted RBP11.81□□□□□ -0.52
RHO-201ENST00000296271 DPPA5A6NC42 116 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 CD3EAPO15446 510 aaKnown RBP11.8□□□□□ -0.52
RHO-201ENST00000296271 IPO13O94829 963 aaKnown RBP11.8□□□□□ -0.52
RHO-201ENST00000296271 RTN3O95197 1032 aaPredicted RBP11.8□□□□□ -0.52
RHO-201ENST00000296271 ALDH1A1P00352 501 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 ZDHHC11BP0C7U3 371 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 SPATA31D3P0C874 917 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 UBTFL6P0CB48 400 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms