RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 CA4P22748 312 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 MGAT1P26572 445 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 DRD3P35462 400 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 DGKEP52429 567 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 CDK16Q00536 496 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 CCDC38Q502W7 563 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 LRRC8BQ6P9F7 803 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.22■□□□□ 0.03
CCDC140-201ENST00000295226 LINC00523Q86TU6 105 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 CCDC25Q86WR0 208 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 SPEM1Q8N4L4 309 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 MCUQ8NE86 351 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 SH3GL2Q99962 352 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 ADGRE3Q9BY15 652 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 POLMQ9NP87 494 aaPredicted RBP15.22■□□□□ 0.03
CCDC140-201ENST00000295226 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.22■□□□□ 0.03
CCDC140-201ENST00000295226 GGT7Q9UJ14 662 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 ITM2BQ9Y287 266 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 ARIH1Q9Y4X5 557 aaPredicted RBP15.22■□□□□ 0.03
CCDC140-201ENST00000295226 A6NNZ2 444 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 AURKAO14965 403 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 BUD23O43709 281 aaKnown RBP15.22■□□□□ 0.03
CCDC140-201ENST00000295226 SLC4A1P02730 911 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 FAM153BP0C7A2 387 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 AOC1P19801 751 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 ITGB7P26010 798 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 HNF1BP35680 557 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 P2RY2P41231 377 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 MSLNQ13421 630 aaPredicted RBP15.22■□□□□ 0.03
CCDC140-201ENST00000295226 POU6F1Q14863 301 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 UGP2Q16851 508 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 BBS9Q3SYG4 887 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 TUBB8Q3ZCM7 444 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 FAM153CQ494X1 144 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 SPDYCQ5MJ68 293 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 FAM46CQ5VWP2 391 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 FBXL19Q6PCT2 694 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 BRAT1Q6PJG6 821 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 MICALCLQ6ZW33 695 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 TSPAN33Q86UF1 283 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 FAM124AQ86V42 546 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 MDGA1Q8NFP4 955 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 TSTD1Q8NFU3 115 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 BLOC1S5Q8TDH9 187 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 PBXIP1Q96AQ6 731 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 TRIM56Q9BRZ2 755 aaKnown RBP15.22■□□□□ 0.03
CCDC140-201ENST00000295226 FAM129AQ9BZQ8 928 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 PCDH12Q9NPG4 1184 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 DYRK4Q9NR20 520 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 FBXL12Q9NXK8 326 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 BCCIPQ9P287 314 aaKnown RBP eCLIP15.22■□□□□ 0.03
CCDC140-201ENST00000295226 DKK3Q9UBP4 350 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 EBF1Q9UH73 591 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 PHTF1Q9UMS5 762 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 MYLKQ15746 1914 aa15.22■□□□□ 0.03
CCDC140-201ENST00000295226 TSPAN11A1L157 253 aa15.21■□□□□ 0.03
CCDC140-201ENST00000295226 FAM86C2PA6NEL3 165 aa15.21■□□□□ 0.03
CCDC140-201ENST00000295226 NPIPB15A6NHN6 443 aaPredicted RBP15.21■□□□□ 0.03
CCDC140-201ENST00000295226 UPK3BL1B0FP48 263 aa15.21■□□□□ 0.03
CCDC140-201ENST00000295226 UPK3BL2E5RIL1 263 aa15.21■□□□□ 0.03
CCDC140-201ENST00000295226 RNASEH2AO75792 299 aaKnown RBP15.21■□□□□ 0.03
CCDC140-201ENST00000295226 ADH1BP00325 375 aa15.21■□□□□ 0.03
CCDC140-201ENST00000295226 DNTTP04053 509 aa15.21■□□□□ 0.03
CCDC140-201ENST00000295226 FGF1P05230 155 aa15.21■□□□□ 0.03
CCDC140-201ENST00000295226 HLA-DPA1P20036 260 aa15.21■□□□□ 0.03
CCDC140-201ENST00000295226 C5AR1P21730 350 aa15.21■□□□□ 0.03
CCDC140-201ENST00000295226 XPAP23025 273 aaPredicted RBP15.21■□□□□ 0.03
CCDC140-201ENST00000295226 SARNPP82979 210 aaKnown RBP15.21■□□□□ 0.03
CCDC140-201ENST00000295226 DHX9Q08211 1270 aaKnown RBP15.21■□□□□ 0.03
CCDC140-201ENST00000295226 CDH17Q12864 832 aa15.21■□□□□ 0.03
CCDC140-201ENST00000295226 FASTKD3Q14CZ7 662 aaKnown RBP15.21■□□□□ 0.03
CCDC140-201ENST00000295226 ERN2Q76MJ5 926 aaKnown RBP15.21■□□□□ 0.03
CCDC140-201ENST00000295226 IGDCC3Q8IVU1 814 aa15.21■□□□□ 0.03
CCDC140-201ENST00000295226 ZCCHC9Q8N567 271 aaKnown RBP15.21■□□□□ 0.03
CCDC140-201ENST00000295226 OMDQ99983 421 aa15.21■□□□□ 0.03
CCDC140-201ENST00000295226 PABPC3Q9H361 631 aaKnown RBP15.21■□□□□ 0.03
CCDC140-201ENST00000295226 ARNT2Q9HBZ2 717 aa15.21■□□□□ 0.03
CCDC140-201ENST00000295226 SPATA6Q9NWH7 488 aaPredicted RBP15.21■□□□□ 0.03
CCDC140-201ENST00000295226 SYBUQ9NX95 663 aa15.21■□□□□ 0.03
CCDC140-201ENST00000295226 KCTD3Q9Y597 815 aa15.21■□□□□ 0.03
CCDC140-201ENST00000295226 A0A0J9YYE9 177 aa15.2■□□□□ 0.02
CCDC140-201ENST00000295226 AGPSO00116 658 aa15.2■□□□□ 0.02
CCDC140-201ENST00000295226 SPINT1O43278 529 aa15.2■□□□□ 0.02
CCDC140-201ENST00000295226 TRBC1P01850 177 aa15.2■□□□□ 0.02
CCDC140-201ENST00000295226 ADRB3P13945 408 aa15.2■□□□□ 0.02
CCDC140-201ENST00000295226 CXCL12P48061 93 aa15.2■□□□□ 0.02
CCDC140-201ENST00000295226 ARL4CP56559 192 aa15.2■□□□□ 0.02
CCDC140-201ENST00000295226 CAV1Q03135 178 aa15.2■□□□□ 0.02
CCDC140-201ENST00000295226 SEPT6Q14141 434 aa15.2■□□□□ 0.02
CCDC140-201ENST00000295226 PTPRCAPQ14761 206 aa15.2■□□□□ 0.02
CCDC140-201ENST00000295226 HIF1AQ16665 826 aa15.2■□□□□ 0.02
CCDC140-201ENST00000295226 PIP5KL1Q5T9C9 394 aa15.2■□□□□ 0.02
CCDC140-201ENST00000295226 TSSK4Q6SA08 328 aa15.2■□□□□ 0.02
CCDC140-201ENST00000295226 CES3Q6UWW8 571 aa15.2■□□□□ 0.02
CCDC140-201ENST00000295226 LRIG3Q6UXM1 1119 aa15.2■□□□□ 0.02
CCDC140-201ENST00000295226 ANKMY2Q8IV38 441 aa15.2■□□□□ 0.02
CCDC140-201ENST00000295226 TMEM105Q8N8V8 129 aa15.2■□□□□ 0.02
CCDC140-201ENST00000295226 PPP1R16AQ96I34 528 aa15.2■□□□□ 0.02
CCDC140-201ENST00000295226 WDR83Q9BRX9 315 aaKnown RBP15.2■□□□□ 0.02
CCDC140-201ENST00000295226 TPSD1Q9BZJ3 242 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms