RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 TRAP1Q12931 704 aaKnown RBP14.77□□□□□ -0.05
CCNF-201ENST00000293968 C6orf10Q5SRN2 563 aa14.77□□□□□ -0.05
CCNF-201ENST00000293968 PIM3Q86V86 326 aa14.77□□□□□ -0.05
CCNF-201ENST00000293968 DHRSXQ8N5I4 330 aa14.77□□□□□ -0.05
CCNF-201ENST00000293968 HMGCLL1Q8TB92 370 aa14.77□□□□□ -0.05
CCNF-201ENST00000293968 ZFP42Q96MM3 310 aa14.77□□□□□ -0.05
CCNF-201ENST00000293968 SCNN1AP37088 669 aa14.77□□□□□ -0.05
CCNF-201ENST00000293968 LILRA4P59901 499 aa14.77□□□□□ -0.05
CCNF-201ENST00000293968 PMS2P3Q13401 168 aa14.77□□□□□ -0.05
CCNF-201ENST00000293968 NFYCQ13952 458 aa14.77□□□□□ -0.05
CCNF-201ENST00000293968 FGD3Q5JSP0 725 aa14.77□□□□□ -0.05
CCNF-201ENST00000293968 KCTD8Q6ZWB6 473 aa14.77□□□□□ -0.05
CCNF-201ENST00000293968 PABPC5Q96DU9 382 aaKnown RBP14.77□□□□□ -0.05
CCNF-201ENST00000293968 GPR78Q96P69 363 aa14.77□□□□□ -0.05
CCNF-201ENST00000293968 HNRNPABQ99729 332 aaKnown RBP14.77□□□□□ -0.05
CCNF-201ENST00000293968 ANKRD60Q9BZ19 345 aa14.77□□□□□ -0.05
CCNF-201ENST00000293968 VPS45Q9NRW7 570 aa14.77□□□□□ -0.05
CCNF-201ENST00000293968 TTC24A2A3L6 582 aaPredicted RBP14.76□□□□□ -0.05
CCNF-201ENST00000293968 OR51F1A6NGY5 319 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 AP3B1O00203 1094 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 TRIM24O15164 1050 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 RBP1P09455 135 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 TFAP2CQ92754 450 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 AKTIPQ9H8T0 292 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 DUS2Q9NX74 493 aaKnown RBP14.76□□□□□ -0.05
CCNF-201ENST00000293968 ZNF510Q9Y2H8 683 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 TCAF1Q9Y4C2 921 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.76□□□□□ -0.05
CCNF-201ENST00000293968 SH3PXD2BA1X283 911 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 LRRC14BA6NHZ5 514 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 NCF1BA6NI72 391 aaPredicted RBP14.76□□□□□ -0.05
CCNF-201ENST00000293968 NCF1CA8MVU1 366 aaPredicted RBP14.76□□□□□ -0.05
CCNF-201ENST00000293968 H3BMM5 538 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 PPP6CO00743 305 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 NCF1P14598 390 aaPredicted RBP14.76□□□□□ -0.05
CCNF-201ENST00000293968 OXTRP30559 389 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 POU4F1Q01851 419 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 GALNT2Q10471 571 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 PFKFB4Q16877 469 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 PPP4R4Q6NUP7 873 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 RAB44Q7Z6P3 723 aaPredicted RBP14.76□□□□□ -0.05
CCNF-201ENST00000293968 GPR180Q86V85 440 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 HDAC10Q969S8 669 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 VPS33AQ96AX1 596 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 CCDC126Q96EE4 140 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 C3orf30Q96M34 536 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 KCNA7Q96RP8 456 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 C9orf16Q9BUW7 83 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 TSR3Q9UJK0 312 aaKnown RBP14.76□□□□□ -0.05
CCNF-201ENST00000293968 TCRBV3S1A0A5B6 114 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 MYBPHLA2RUH7 354 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 ASB14A6NK59 587 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 NME4O00746 187 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 PSMD3O43242 534 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 UGT1A1P22309 533 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 UGT1A4P22310 534 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 UGT1A3P35503 534 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 UGT1A5P35504 534 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 DAOAP59103 153 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 NHSL2Q5HYW2 709 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 AARS2Q5JTZ9 985 aaKnown RBP14.76□□□□□ -0.05
CCNF-201ENST00000293968 RETREG3Q86VR2 466 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 BBS5Q8N3I7 341 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 PTGR2Q8N8N7 351 aaPredicted RBP14.76□□□□□ -0.05
CCNF-201ENST00000293968 TRPC4APQ8TEL6 797 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 GLOD4Q9HC38 313 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 RBPJLQ9UBG7 517 aa14.76□□□□□ -0.05
CCNF-201ENST00000293968 HGFP14210 728 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 PNPLA4P41247 253 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 GEMP55040 296 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 TUBA4AP68366 448 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 YWHAHQ04917 246 aaPredicted RBP14.75□□□□□ -0.05
CCNF-201ENST00000293968 PELI3Q8N2H9 469 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 MIER2Q8N344 545 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 ANKRD49Q8WVL7 239 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 DNAJB3Q8WWF6 145 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 RNF145Q96MT1 663 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 WDR6Q9NNW5 1121 aaKnown RBP14.75□□□□□ -0.05
CCNF-201ENST00000293968 MPP6Q9NZW5 540 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 TARM1B6A8C7 271 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 ADM5C9JUS6 153 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 PCNAP12004 261 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 ITGADQ13349 1161 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 USP41Q3LFD5 358 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 ABRAXAS1Q6UWZ7 409 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 BPIFB6Q8NFQ5 453 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 ZFYVE28Q9HCC9 887 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 IGSF5Q9NSI5 407 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 TBC1D13Q9NVG8 400 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 BMP10O95393 424 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 FYNP06241 537 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 ZNF182P17025 639 aaPredicted RBP14.75□□□□□ -0.05
CCNF-201ENST00000293968 RAB39AQ14964 217 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 RABL3Q5HYI8 236 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 HECTD2Q5U5R9 776 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 MAMDC4Q6UXC1 1216 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 BRD8Q9H0E9 1235 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 FAM124BQ9H5Z6 455 aaPredicted RBP14.75□□□□□ -0.05
CCNF-201ENST00000293968 MEAF6Q9HAF1 191 aa14.75□□□□□ -0.05
CCNF-201ENST00000293968 NT5MQ9NPB1 228 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms