RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 CHADLQ6NUI6 762 aa12.83□□□□□ -0.35
PTCD1-201ENST00000292478 GPR180Q86V85 440 aa12.83□□□□□ -0.35
PTCD1-201ENST00000292478 CENPIQ92674 756 aaPredicted RBP12.83□□□□□ -0.35
PTCD1-201ENST00000292478 RHBDL2Q9NX52 303 aa12.83□□□□□ -0.35
PTCD1-201ENST00000292478 TRAF6Q9Y4K3 522 aa12.83□□□□□ -0.35
PTCD1-201ENST00000292478 CACNA1FO60840 1977 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 URADA6NGE7 173 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 DGKZQ13574 1117 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 PDK3Q15120 406 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 PDZK1Q5T2W1 519 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 KIAA0408Q6ZU52 694 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 EIF3MQ7L2H7 374 aaKnown RBP12.83□□□□□ -0.36
PTCD1-201ENST00000292478 ZNF572Q7Z3I7 529 aaPredicted RBP12.83□□□□□ -0.36
PTCD1-201ENST00000292478 DPF3Q92784 378 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 LINGO1Q96FE5 620 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 ACBD6Q9BR61 282 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 MAGEL2Q9UJ55 1249 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 EFCAB10A6NFE3 127 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 TSPAN19P0C672 248 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 PRKAR2AP13861 404 aaKnown RBP12.83□□□□□ -0.36
PTCD1-201ENST00000292478 L1CAMP32004 1257 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 BRCC3P46736 316 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 RPL38P63173 70 aaKnown RBP12.83□□□□□ -0.36
PTCD1-201ENST00000292478 RNASEH2BQ5TBB1 312 aaKnown RBP12.83□□□□□ -0.36
PTCD1-201ENST00000292478 TTC7BQ86TV6 843 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 CDYL2Q8N8U2 506 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 MAGEE2Q8TD90 523 aaPredicted RBP12.83□□□□□ -0.36
PTCD1-201ENST00000292478 KLHL25Q9H0H3 589 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 SLITRK2Q9H156 845 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 SLCO1B3Q9NPD5 702 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 EIF2B3Q9NR50 452 aaKnown RBP12.83□□□□□ -0.36
PTCD1-201ENST00000292478 SLC17A7Q9P2U7 560 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 DAPK2Q9UIK4 370 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 BUD23O43709 281 aaKnown RBP12.83□□□□□ -0.36
PTCD1-201ENST00000292478 PDE9AO76083 593 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 ZBTB48P10074 688 aaPredicted RBP12.83□□□□□ -0.36
PTCD1-201ENST00000292478 WARSP23381 471 aaKnown RBP12.83□□□□□ -0.36
PTCD1-201ENST00000292478 PRDX6P30041 224 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 C21orf59P57076 290 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 SPANXN2Q5MJ10 180 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 SLC24A5Q71RS6 500 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 CUZD1Q86UP6 607 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 GRIN3AQ8TCU5 1115 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 MYDGFQ969H8 173 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 RCN3Q96D15 328 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 MYO19Q96H55 970 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 SLC4A5Q9BY07 1137 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 PAIP1Q9H074 479 aaKnown RBP12.83□□□□□ -0.36
PTCD1-201ENST00000292478 PNPLA3Q9NST1 481 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 SLC27A5Q9Y2P5 690 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 HBS1LQ9Y450 684 aaKnown RBP12.83□□□□□ -0.36
PTCD1-201ENST00000292478 KCNE2Q9Y6J6 123 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 A8MX80 341 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 STX11O75558 287 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 C2P06681 752 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 RIPK1Q13546 671 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 DPYSQ14117 519 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 RD3Q7Z3Z2 195 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 SFRP1Q8N474 314 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 TSPAN14Q8NG11 270 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 SNX27Q96L92 541 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 SLC9A7Q96T83 725 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 CORO1BQ9BR76 489 aa12.83□□□□□ -0.36
PTCD1-201ENST00000292478 A0A1W2PQH9 124 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 USP2O75604 605 aaPredicted RBP12.82□□□□□ -0.36
PTCD1-201ENST00000292478 SLC22A3O75751 556 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 KRT36O76013 467 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 RPL5P46777 297 aaKnown RBP12.82□□□□□ -0.36
PTCD1-201ENST00000292478 CCR3P51677 355 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 ANGPT1Q15389 498 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 LSM12Q3MHD2 195 aaKnown RBP12.82□□□□□ -0.36
PTCD1-201ENST00000292478 RAET1GQ6H3X3 334 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 CERS6Q6ZMG9 384 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.82□□□□□ -0.36
PTCD1-201ENST00000292478 TNS4Q8IZW8 715 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 MARK4Q96L34 752 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 BPIFA1Q9NP55 256 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.82□□□□□ -0.36
PTCD1-201ENST00000292478 ZMYND8Q9ULU4 1186 aaPredicted RBP12.82□□□□□ -0.36
PTCD1-201ENST00000292478 GSTK1Q9Y2Q3 226 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 LMO7Q8WWI1 1683 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 PTGES3LE9PB15 166 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 EPHA3P29320 983 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 GSTM5P46439 218 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 THOP1P52888 689 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 MAXP61244 160 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 GALNT3Q14435 633 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 CYP1B1Q16678 543 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 ALFQ53S48 1182 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 XKR6Q5GH73 641 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 ALYREFQ86V81 257 aaKnown RBP12.82□□□□□ -0.36
PTCD1-201ENST00000292478 STYXQ8WUJ0 223 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 FBXO10Q9UK96 956 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 GTF2A1LQ9UNN4 478 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 AFDNP55196 1824 aaKnown RBP12.82□□□□□ -0.36
PTCD1-201ENST00000292478 DHRS12A0PJE2 317 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 SYN3O14994 580 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 GRM6O15303 877 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 MFSD11O43934 449 aa12.82□□□□□ -0.36
PTCD1-201ENST00000292478 FKTNO75072 461 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms