RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 AAR2Q9Y312 384 aaKnown RBP11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 WDR27A2RRH5 827 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 E5RJQ4 531 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 RBAK-RBAKDNI3L0D1 243 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 PSMD12O00232 456 aaPredicted RBP11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 PMPCBO75439 489 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 RHOBTB1O94844 696 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 WARSP23381 471 aaKnown RBP11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 RPL14P50914 215 aaKnown RBP11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 HK2P52789 917 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 NAGLUP54802 743 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 DPYSL3Q14195 570 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 ZNF284Q2VY69 593 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 CES3Q6UWW8 571 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 CEP68Q76N32 757 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 EID3Q8N140 333 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 SCAIQ8N9R8 606 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 DQX1Q8TE96 717 aaKnown RBP11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 HSPBAP1Q96EW2 488 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 SHDQ96IW2 340 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 ZNF317Q96PQ6 595 aaPredicted RBP11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 EPB41L1Q9H4G0 881 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 RIBC2Q9H4K1 309 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 AVENQ9NQS1 362 aaPredicted RBP11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 ANAPC2Q9UJX6 822 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 RAB26Q9ULW5 256 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 PRPF19Q9UMS4 504 aaKnown RBP11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 TRDMT1O14717 391 aaKnown RBP11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 FGF10O15520 208 aaPredicted RBP11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 LYPLA1O75608 230 aaPredicted RBP11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 PDE9AO76083 593 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 PCDH8O95206 1070 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 TKTP29401 623 aaKnown RBP11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 TPTEP56180 551 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 TARBP2Q15633 366 aaKnown RBP11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 KLHL12Q53G59 568 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 ARMC6Q6NXE6 501 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 KATNAL2Q8IYT4 538 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 POF1BQ8WVV4 589 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 ZHX1-C8orf76Q96EF9 292 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 PLEKHA8Q96JA3 519 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 TCF12Q99081 682 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 ADGRE3Q9BY15 652 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 FANCEQ9HB96 536 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 NMRAL1Q9HBL8 299 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 LIMD1Q9UGP4 676 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 SNAP91O60641 907 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 DDX6P26196 483 aaKnown RBP eCLIP11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 PIK3R1P27986 724 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 GHRHRQ02643 423 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 ARCQ7LC44 396 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 PARP8Q8N3A8 854 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 EPS8L1Q8TE68 723 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 PROX1Q92786 737 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 CIB1Q99828 191 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 SPRTNQ9H040 489 aaPredicted RBP11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 NKX2-4Q9H2Z4 354 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 CXorf21Q9HAI6 301 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 EFCAB10A6NFE3 127 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 C2orf81A6NN90 581 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 C1QTNF3-AMACRE9PGA6 284 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 ALOX15BO15296 676 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 PRPF4O43172 522 aaKnown RBP eCLIP11.42□□□□□ -0.582e-8■■■■□ 20.5
NPC1L1-201ENST00000289547 ERBB2P04626 1255 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 MAGEA8P43361 318 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 TRIP4Q15650 581 aaPredicted RBP11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 COLGALT1Q8NBJ5 622 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 ATAD1Q8NBU5 361 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 SUSD3Q96L08 255 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 HPS4Q9NQG7 708 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 VPS9D1Q9Y2B5 631 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 TCHHQ07283 1943 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 TRUB2O95900 331 aaKnown RBP11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 SOD2P04179 222 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 MPOP05164 745 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 FOSL2P15408 326 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 FOXN2P32314 431 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 MTX3Q5HYI7 312 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 TMEM26Q6ZUK4 368 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 SLCO6A1Q86UG4 719 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 UTP15Q8TED0 518 aaKnown RBP11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 CNTN3Q9P232 1028 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 LIASO43766 372 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 SIN3BO75182 1162 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 FSHRP23945 695 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 NRIP1P48552 1158 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 SEPHS1P49903 392 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 NEK3P51956 506 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 SLC10A6Q3KNW5 377 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 FAM45BPQ6NSW5 357 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 PRSS55Q6UWB4 352 aaPredicted RBP11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 RBM12BQ8IXT5 1001 aaKnown RBP11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 PPP1R10Q96QC0 940 aaKnown RBP11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 LRRC4CQ9HCJ2 640 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 CDH22Q9UJ99 828 aa11.42□□□□□ -0.58
NPC1L1-201ENST00000289547 FAM155AB1AL88 458 aaPredicted RBP11.41□□□□□ -0.58
NPC1L1-201ENST00000289547 C5orf58C9J3I9 102 aa11.41□□□□□ -0.58
NPC1L1-201ENST00000289547 TPP1O14773 563 aa11.41□□□□□ -0.58
NPC1L1-201ENST00000289547 RBP1P09455 135 aa11.41□□□□□ -0.58
NPC1L1-201ENST00000289547 CYP2A6P11509 494 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms