RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 DDX6P26196 483 aaKnown RBP eCLIP10.22□□□□□ -0.77
C9orf43-201ENST00000288462 HOXA9P31269 272 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 ARRB2P32121 409 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 PGGT1BP53609 377 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 C1QTNF8P60827 252 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 DLG1Q12959 904 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 ITGA9Q13797 1035 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 TAF1AQ15573 450 aaPredicted RBP10.22□□□□□ -0.77
C9orf43-201ENST00000288462 CTC1Q2NKJ3 1217 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 TYSND1Q2T9J0 566 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 FAM91A1Q658Y4 838 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 ATG14Q6ZNE5 492 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 OR13C4Q8NGS5 318 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 OR6P1Q8NGX9 317 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 POF1BQ8WVV4 589 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 TSPAN17Q96FV3 270 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 OLFM1Q99784 485 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 C2orf49Q9BVC5 232 aaPredicted RBP10.22□□□□□ -0.77
C9orf43-201ENST00000288462 TXLNGQ9NUQ3 528 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 HCFC1R1Q9NWW0 138 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 ZFP69BQ9UJL9 534 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 CORO1CQ9ULV4 474 aaPredicted RBP10.22□□□□□ -0.77
C9orf43-201ENST00000288462 ATG2AQ2TAZ0 1938 aa10.22□□□□□ -0.77
C9orf43-201ENST00000288462 CXorf51AA0A1B0GTR3 108 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.21□□□□□ -0.77
C9orf43-201ENST00000288462 H0YHG0 523 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 FZD6O60353 706 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 MOSPD3O75425 235 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 ATP5BP06576 529 aaKnown RBP10.21□□□□□ -0.77
C9orf43-201ENST00000288462 PDHA1P08559 390 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 ALOX15P16050 662 aaPredicted RBP10.21□□□□□ -0.77
C9orf43-201ENST00000288462 PRKAA2P54646 552 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 ABCE1P61221 599 aaKnown RBP10.21□□□□□ -0.77
C9orf43-201ENST00000288462 RHOAP61586 193 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 AP1S1P61966 158 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 PTPRCAPQ14761 206 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 HECTD2Q5U5R9 776 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 ASRGL1Q7L266 308 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 GLT6D1Q7Z4J2 308 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 MTDHQ86UE4 582 aaKnown RBP10.21□□□□□ -0.77
C9orf43-201ENST00000288462 C7orf61Q8IZ16 206 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 APCDD1Q8J025 514 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 FSTL5Q8N475 847 aaPredicted RBP10.21□□□□□ -0.77
C9orf43-201ENST00000288462 LPCAT1Q8NF37 534 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 FIBINQ8TAL6 211 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 PIWIL2Q8TC59 973 aaKnown RBP10.21□□□□□ -0.77
C9orf43-201ENST00000288462 DDI1Q8WTU0 396 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 SCG3Q8WXD2 468 aaKnown RBP10.21□□□□□ -0.77
C9orf43-201ENST00000288462 ACDQ96AP0 544 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 LMLNQ96KR4 655 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 NDNQ99608 321 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 ADGRE3Q9BY15 652 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 WWP1Q9H0M0 922 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 SUDS3Q9H7L9 328 aaPredicted RBP10.21□□□□□ -0.77
C9orf43-201ENST00000288462 SAR1AQ9NR31 198 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 MAN1C1Q9NR34 630 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 IGSF5Q9NSI5 407 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 OXSMQ9NWU1 459 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 XPR1Q9UBH6 696 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 HEY2Q9UBP5 337 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 DNAJC16Q9Y2G8 782 aa10.21□□□□□ -0.77
C9orf43-201ENST00000288462 NUP210Q8TEM1 1887 aaPredicted RBP10.21□□□□□ -0.78
C9orf43-201ENST00000288462 SOBPA7XYQ1 873 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 CD3EAPO15446 510 aaKnown RBP10.21□□□□□ -0.78
C9orf43-201ENST00000288462 BUD23O43709 281 aaKnown RBP10.21□□□□□ -0.78
C9orf43-201ENST00000288462 TRIM13O60858 407 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 RASSF9O75901 435 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 ATP5HO75947 161 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 GLP2RO95838 553 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 HSPA1AP0DMV8 641 aaKnown RBP10.21□□□□□ -0.78
C9orf43-201ENST00000288462 HSPA1BP0DMV9 641 aaKnown RBP10.21□□□□□ -0.78
C9orf43-201ENST00000288462 HOXB8P17481 243 aaPredicted RBP10.21□□□□□ -0.78
C9orf43-201ENST00000288462 SERPINB3P29508 390 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 KPNA2P52292 529 aaKnown RBP10.21□□□□□ -0.78
C9orf43-201ENST00000288462 STC1P52823 247 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 PLK1P53350 603 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 SLC12A2P55011 1212 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 LMAN2Q12907 356 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 SEMA3AQ14563 771 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 GPR158Q5T848 1215 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 FAM45BPQ6NSW5 357 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 MRNIPQ6NTE8 343 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 RETSATQ6NUM9 610 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 AFTPHQ6ULP2 937 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 NAPRTQ6XQN6 538 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.21□□□□□ -0.78
C9orf43-201ENST00000288462 MDGA1Q8NFP4 955 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 OR4L1Q8NH43 312 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 FAM45AQ8TCE6 357 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 SH3RF2Q8TEC5 729 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 SREK1Q8WXA9 508 aaKnown RBP10.21□□□□□ -0.78
C9orf43-201ENST00000288462 RMDN1Q96DB5 314 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 CDKN2AIPNLQ96HQ2 116 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 C17orf80Q9BSJ5 609 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 STN1Q9H668 368 aaKnown RBP10.21□□□□□ -0.78
C9orf43-201ENST00000288462 SLC40A1Q9NP59 571 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 CATSPERZQ9NTU4 200 aa10.21□□□□□ -0.78
C9orf43-201ENST00000288462 MARCOQ9UEW3 520 aaPredicted RBP10.21□□□□□ -0.78
C9orf43-201ENST00000288462 RUVBL2Q9Y230 463 aaKnown RBP10.21□□□□□ -0.78
C9orf43-201ENST00000288462 FCF1Q9Y324 198 aaKnown RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms