RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 PSKH2Q96QS6 385 aa21.08■□□□□ 0.97
YBX3-202ENST00000279550 TRIB3Q96RU7 358 aa21.08■□□□□ 0.97
YBX3-202ENST00000279550 FAM167BQ9BTA0 163 aa21.08■□□□□ 0.97
YBX3-202ENST00000279550 CINPQ9BW66 212 aaPredicted RBP21.08■□□□□ 0.97
YBX3-202ENST00000279550 C1QTNF1Q9BXJ1 281 aa21.08■□□□□ 0.97
YBX3-202ENST00000279550 RASSF4Q9H2L5 321 aa21.08■□□□□ 0.97
YBX3-202ENST00000279550 CLDND1Q9NY35 253 aa21.08■□□□□ 0.97
YBX3-202ENST00000279550 C5orf42Q9H799 3197 aa21.08■□□□□ 0.97
YBX3-202ENST00000279550 EYSQ5T1H1 3165 aa21.08■□□□□ 0.96
YBX3-202ENST00000279550 LDB2O43679 373 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 LYPLA1O75608 230 aaPredicted RBP21.07■□□□□ 0.96
YBX3-202ENST00000279550 DCTN3O75935 186 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 PAPSS2O95340 614 aaPredicted RBP21.07■□□□□ 0.96
YBX3-202ENST00000279550 UGP2Q16851 508 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 CES5AQ6NT32 575 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 ATG14Q6ZNE5 492 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 IFT43Q96FT9 208 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 S1PR5Q9H228 398 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 FBXO6Q9NRD1 293 aaPredicted RBP21.07■□□□□ 0.96
YBX3-202ENST00000279550 GDE1Q9NZC3 331 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 COPG2Q9UBF2 871 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 FAM95CA0A1B0GW59 222 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 CBX4O00257 560 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 SOX1O00570 391 aaPredicted RBP21.07■□□□□ 0.96
YBX3-202ENST00000279550 SNAP91O60641 907 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 HAUS5O94927 633 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 CD160O95971 181 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 PIRTP0C851 137 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 SLC35E2BP0CK96 405 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 IGFBP4P22692 258 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 MZF1P28698 734 aaPredicted RBP21.07■□□□□ 0.96
YBX3-202ENST00000279550 HADHAP40939 763 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 ARFIP2P53365 341 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 ZNF460Q14592 562 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 PTPRCAPQ14761 206 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 HSF5Q4G112 596 aaPredicted RBP21.07■□□□□ 0.96
YBX3-202ENST00000279550 FBXW10Q5XX13 1052 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 CEP97Q8IW35 865 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 CELF5Q8N6W0 485 aaKnown RBP21.07■□□□□ 0.96
YBX3-202ENST00000279550 BHMTQ93088 406 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 ASB16Q96NS5 453 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 LRRC37BQ96QE4 947 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 MUC3BQ9H195 1237 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 TRIM33Q9UPN9 1127 aa21.07■□□□□ 0.96
YBX3-202ENST00000279550 BUD23O43709 281 aaKnown RBP21.06■□□□□ 0.96
YBX3-202ENST00000279550 FGF1P05230 155 aa21.06■□□□□ 0.96
YBX3-202ENST00000279550 SERPINF2P08697 491 aa21.06■□□□□ 0.96
YBX3-202ENST00000279550 CPA3P15088 417 aa21.06■□□□□ 0.96
YBX3-202ENST00000279550 CR2P20023 1033 aa21.06■□□□□ 0.96
YBX3-202ENST00000279550 HLA-DPA1P20036 260 aa21.06■□□□□ 0.96
YBX3-202ENST00000279550 ARRB2P32121 409 aa21.06■□□□□ 0.96
YBX3-202ENST00000279550 CD151P48509 253 aa21.06■□□□□ 0.96
YBX3-202ENST00000279550 ARF5P84085 180 aa21.06■□□□□ 0.96
YBX3-202ENST00000279550 SETDB1Q15047 1291 aa21.06■□□□□ 0.96
YBX3-202ENST00000279550 CCDC153Q494R4 210 aa21.06■□□□□ 0.96
YBX3-202ENST00000279550 MPPE1Q53F39 396 aa21.06■□□□□ 0.96
YBX3-202ENST00000279550 FAM78AQ5JUQ0 283 aa21.06■□□□□ 0.96
YBX3-202ENST00000279550 ATAT1Q5SQI0 421 aa21.06■□□□□ 0.96
YBX3-202ENST00000279550 MPP7Q5T2T1 576 aa21.06■□□□□ 0.96
YBX3-202ENST00000279550 CNSTQ6PJW8 725 aa21.06■□□□□ 0.96
YBX3-202ENST00000279550 EP400NLQ6ZTU2 488 aa21.06■□□□□ 0.96
YBX3-202ENST00000279550 TPGS1Q6ZTW0 290 aa21.06■□□□□ 0.96
YBX3-202ENST00000279550 CARNMT1Q8N4J0 409 aa21.06■□□□□ 0.96
YBX3-202ENST00000279550 PPP1R14CQ8TAE6 165 aa21.06■□□□□ 0.96
YBX3-202ENST00000279550 WFDC5Q8TCV5 224 aa21.06■□□□□ 0.96
YBX3-202ENST00000279550 DDI1Q8WTU0 396 aa21.06■□□□□ 0.96
YBX3-202ENST00000279550 SLC40A1Q9NP59 571 aa21.06■□□□□ 0.96
YBX3-202ENST00000279550 TBC1D14Q9P2M4 693 aa21.06■□□□□ 0.96
YBX3-202ENST00000279550 OR51F1A6NGY5 319 aa21.05■□□□□ 0.96
YBX3-202ENST00000279550 G3V2L1 256 aa21.05■□□□□ 0.96
YBX3-202ENST00000279550 H0YHG0 523 aa21.05■□□□□ 0.96
YBX3-202ENST00000279550 ZMPSTE24O75844 475 aa21.05■□□□□ 0.96
YBX3-202ENST00000279550 MYL2P10916 166 aa21.05■□□□□ 0.96
YBX3-202ENST00000279550 COL19A1Q14993 1142 aa21.05■□□□□ 0.96
YBX3-202ENST00000279550 RBM20Q5T481 1227 aaKnown RBP21.05■□□□□ 0.96
YBX3-202ENST00000279550 LINGO4Q6UY18 593 aa21.05■□□□□ 0.96
YBX3-202ENST00000279550 RAPH1Q70E73 1250 aa21.05■□□□□ 0.96
YBX3-202ENST00000279550 MTDHQ86UE4 582 aaKnown RBP21.05■□□□□ 0.96
YBX3-202ENST00000279550 BBS5Q8N3I7 341 aa21.05■□□□□ 0.96
YBX3-202ENST00000279550 BLOC1S5Q8TDH9 187 aa21.05■□□□□ 0.96
YBX3-202ENST00000279550 KCTD4Q8WVF5 259 aa21.05■□□□□ 0.96
YBX3-202ENST00000279550 SMARCD2Q92925 531 aa21.05■□□□□ 0.96
YBX3-202ENST00000279550 HDAC10Q969S8 669 aa21.05■□□□□ 0.96
YBX3-202ENST00000279550 PRR11Q96HE9 360 aaPredicted RBP21.05■□□□□ 0.96
YBX3-202ENST00000279550 ELMO2Q96JJ3 720 aa21.05■□□□□ 0.96
YBX3-202ENST00000279550 FAM161BQ96MY7 647 aa21.05■□□□□ 0.96
YBX3-202ENST00000279550 MARCH4Q9P2E8 410 aaPredicted RBP21.05■□□□□ 0.96
YBX3-202ENST00000279550 HEY2Q9UBP5 337 aa21.05■□□□□ 0.96
YBX3-202ENST00000279550 MARCOQ9UEW3 520 aaPredicted RBP21.05■□□□□ 0.96
YBX3-202ENST00000279550 ANKRD6Q9Y2G4 727 aa21.05■□□□□ 0.96
YBX3-202ENST00000279550 ARL5AQ9Y689 179 aa21.05■□□□□ 0.96
YBX3-202ENST00000279550 TRIOBPQ9H2D6 2365 aa21.05■□□□□ 0.96
YBX3-202ENST00000279550 NUP210Q8TEM1 1887 aaPredicted RBP21.04■□□□□ 0.96
YBX3-202ENST00000279550 H0Y626 953 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 LUC7L3O95232 432 aaKnown RBP21.04■□□□□ 0.96
YBX3-202ENST00000279550 NDST3O95803 873 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 EPOP01588 193 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 SERPINE1P05121 402 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 LTBRP36941 435 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 TAS2R39P59534 338 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms