RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 ZNF831Q5JPB2 1677 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 MED7O43513 233 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 KPNA6O60684 536 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 TNNC2P02585 160 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 CAPGP40121 348 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 CCDC185Q8N715 623 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 ITPKCQ96DU7 683 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 P2RY11Q96G91 374 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 CITED4Q96RK1 184 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 FTHL17Q9BXU8 183 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 ALOXE3Q9BYJ1 711 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 ZNF518BQ9C0D4 1074 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 ATXN3LQ9H3M9 355 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 GDAP2Q9NXN4 497 aa12.89□□□□□ -0.35
HERC6-202ENST00000273960 CNOT11Q9UKZ1 510 aaKnown RBP12.89□□□□□ -0.35
HERC6-202ENST00000273960 ZNF214Q9UL59 606 aaPredicted RBP12.89□□□□□ -0.35
HERC6-202ENST00000273960 BCLAF3A2AJT9 711 aaKnown RBP12.88□□□□□ -0.35
HERC6-202ENST00000273960 C2CD4BA6NLJ0 364 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 H3BMM5 538 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 NME4O00746 187 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 GTF2E2P29084 291 aaKnown RBP12.88□□□□□ -0.35
HERC6-202ENST00000273960 ATICP31939 592 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 PHC1P78364 1004 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 SP2Q02086 613 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 FOXD4Q12950 439 aaPredicted RBP12.88□□□□□ -0.35
HERC6-202ENST00000273960 LAPTM5Q13571 262 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 INPP5AQ14642 412 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 SLC36A3Q495N2 470 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.88□□□□□ -0.35
HERC6-202ENST00000273960 SCIMPQ6UWF3 145 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 RETREG3Q86VR2 466 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 FBXO16Q8IX29 292 aaPredicted RBP12.88□□□□□ -0.35
HERC6-202ENST00000273960 SYTL1Q8IYJ3 562 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 FIG4Q92562 907 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 VPS33AQ96AX1 596 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 CPNE1Q99829 537 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 CNGB3Q9NQW8 809 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 IPO11Q9UI26 975 aaKnown RBP12.88□□□□□ -0.35
HERC6-202ENST00000273960 HCRTO43612 131 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 MFSD11O43934 449 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 IFITM2Q01629 132 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 MADCAM1Q13477 382 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 TAZQ16635 292 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 GRTP1Q5TC63 336 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 RALGPS2Q86X27 583 aaPredicted RBP12.88□□□□□ -0.35
HERC6-202ENST00000273960 ANKRD13BQ86YJ7 626 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 SFRP1Q8N474 314 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 RNF149Q8NC42 400 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 ZNF420Q8TAQ5 688 aaPredicted RBP12.88□□□□□ -0.35
HERC6-202ENST00000273960 ZNF347Q96SE7 839 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 ARPC5LQ9BPX5 153 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 C9orf16Q9BUW7 83 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 SLCO3A1Q9UIG8 710 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 TSPAN16Q9UKR8 245 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 VANGL2Q9ULK5 521 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 CAB39Q9Y376 341 aaPredicted RBP12.88□□□□□ -0.35
HERC6-202ENST00000273960 UGT2A1Q9Y4X1 527 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 PCDHGA8Q9Y5G5 932 aa12.88□□□□□ -0.35
HERC6-202ENST00000273960 TCRBV3S1A0A5B6 114 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 TMEM114B3SHH9 223 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 B4GALT5O43286 388 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 MSI1O43347 362 aaKnown RBP12.87□□□□□ -0.35
HERC6-202ENST00000273960 ASNA1O43681 348 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 HTR1BP28222 390 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 NMBRP28336 390 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 STAT5BP51692 787 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 LIMK2P53671 638 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 STX1BP61266 288 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 GALNT2Q10471 571 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 LRP8Q14114 963 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 FAM83EQ2M2I3 478 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 CYBRD1Q53TN4 286 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 MAP1SQ66K74 1059 aaPredicted RBP12.87□□□□□ -0.35
HERC6-202ENST00000273960 KDM1BQ8NB78 822 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 ELMO2Q96JJ3 720 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 NTPCRQ9BSD7 190 aaKnown RBP12.87□□□□□ -0.35
HERC6-202ENST00000273960 MROQ9BYG7 248 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 SMURF2Q9HAU4 748 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 GIMAP4Q9NUV9 329 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 BFARQ9NZS9 450 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 SYCE1LA8MT33 242 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 XPNPEP2O43895 674 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 CYP2C8P10632 490 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 BMP4P12644 408 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 KCNA5P22460 613 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 LAMC2Q13753 1193 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 GPR162Q16538 588 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 BROXQ5VW32 411 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 UGT3A1Q6NUS8 523 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 REM2Q8IYK8 340 aaPredicted RBP12.87□□□□□ -0.35
HERC6-202ENST00000273960 TXNDC5Q8NBS9 432 aaKnown RBP12.87□□□□□ -0.35
HERC6-202ENST00000273960 MTMR14Q8NCE2 650 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 TOR3AQ9H497 397 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 KLHL3Q9UH77 587 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 U3KQV3 271 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 GPR25O00155 361 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 SUPT7LO94864 414 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 PSMB9P28065 219 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 POU6F1Q14863 301 aa12.87□□□□□ -0.35
HERC6-202ENST00000273960 INSCQ1MX18 579 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms