RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 ERICH4A6NGS2 130 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 GJB3O75712 270 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 CRTAMO95727 393 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 PRLP01236 227 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 CEBPBP17676 345 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 RPL26P61254 145 aaKnown RBP15.43■□□□□ 0.06
COPS3-201ENST00000268717 NEPROQ6NW34 567 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 TRIM67Q6ZTA4 783 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 PIGWQ7Z7B1 504 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 APCDD1Q8J025 514 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 DCLK2Q8N568 766 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.43■□□□□ 0.06
COPS3-201ENST00000268717 RIN3Q8TB24 985 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 ITFG1Q8TB96 612 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 LRRC8CQ8TDW0 803 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 STYXQ8WUJ0 223 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 PTPRN2Q92932 1015 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 IRF7Q92985 503 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 ISG20Q96AZ6 181 aaKnown RBP15.43■□□□□ 0.06
COPS3-201ENST00000268717 VPS39Q96JC1 886 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 C19orf43Q9BQ61 176 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 KCNK12Q9HB15 430 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 PCMTD2Q9NV79 361 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 SLC17A7Q9P2U7 560 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 RPL26L1Q9UNX3 145 aaKnown RBP15.43■□□□□ 0.06
COPS3-201ENST00000268717 HS3ST2Q9Y278 367 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 PRR33A8MZF0 331 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 EBAG9O00559 213 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 KLF11O14901 512 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 FZD6O60353 706 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 TYK2P29597 1187 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 FOXN2P32314 431 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 SULT2A1Q06520 285 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 SIGLEC14Q08ET2 396 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 PDE1CQ14123 709 aaPredicted RBP15.43■□□□□ 0.06
COPS3-201ENST00000268717 LINGO4Q6UY18 593 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 CDHR3Q6ZTQ4 885 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 SRLQ86TD4 932 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 ARID3BQ8IVW6 561 aaPredicted RBP15.43■□□□□ 0.06
COPS3-201ENST00000268717 TRIM42Q8IWZ5 723 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 UBALD2Q8IYN6 164 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 CELF5Q8N6W0 485 aaKnown RBP15.43■□□□□ 0.06
COPS3-201ENST00000268717 RAB3IL1Q8TBN0 382 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 FGF13Q92913 245 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 NSMCE3Q96MG7 304 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 FAM111AQ96PZ2 611 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 PAIP2Q9BPZ3 127 aaKnown RBP15.43■□□□□ 0.06
COPS3-201ENST00000268717 FAM107BQ9H098 131 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 SNX15Q9NRS6 342 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 HACD3Q9P035 362 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 CDH7Q9ULB5 785 aa15.43■□□□□ 0.06
COPS3-201ENST00000268717 MIA3Q5JRA6 1907 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 MYLKQ15746 1914 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 BIRC5O15392 142 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 SOCS5O75159 536 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 IL1BP01584 269 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 AHSGP02765 367 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 CD70P32970 193 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 SLC1A2P43004 574 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 LEPRP48357 1165 aaKnown RBP15.42■□□□□ 0.06
COPS3-201ENST00000268717 CD151P48509 253 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 GALNT3Q14435 633 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 TAF1AQ15573 450 aaPredicted RBP15.42■□□□□ 0.06
COPS3-201ENST00000268717 QPCTQ16769 361 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 PITRM1Q5JRX3 1037 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 MICALCLQ6ZW33 695 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 TMEM25Q86YD3 366 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 GPR150Q8NGU9 434 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 BHMTQ93088 406 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 EXOC2Q96KP1 924 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 CEP44Q9C0F1 390 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 RABEP2Q9H5N1 569 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 PLK2Q9NYY3 685 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.42■□□□□ 0.06
COPS3-201ENST00000268717 GGT7Q9UJ14 662 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 FBXO5Q9UKT4 447 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 INTS6Q9UL03 887 aaKnown RBP15.42■□□□□ 0.06
COPS3-201ENST00000268717 CLEC4EQ9ULY5 219 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 CHKBQ9Y259 395 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 ZNF318Q5VUA4 2279 aa15.42■□□□□ 0.06
COPS3-201ENST00000268717 ANKRD66B4E2M5 251 aa15.41■□□□□ 0.06
COPS3-201ENST00000268717 RPP40O75818 363 aaKnown RBP15.41■□□□□ 0.06
COPS3-201ENST00000268717 HLA-FP30511 346 aa15.41■□□□□ 0.06
COPS3-201ENST00000268717 GRIA4P48058 902 aa15.41■□□□□ 0.06
COPS3-201ENST00000268717 SERPINB4P48594 390 aa15.41■□□□□ 0.06
COPS3-201ENST00000268717 ZNF140P52738 457 aaPredicted RBP15.41■□□□□ 0.06
COPS3-201ENST00000268717 PRAMEP78395 509 aa15.41■□□□□ 0.06
COPS3-201ENST00000268717 TRAF2Q12933 501 aa15.41■□□□□ 0.06
COPS3-201ENST00000268717 ZNF470Q6ECI4 717 aa15.41■□□□□ 0.06
COPS3-201ENST00000268717 CCDC91Q7Z6B0 441 aa15.41■□□□□ 0.06
COPS3-201ENST00000268717 KIAA0907Q7Z7F0 614 aaPredicted RBP15.41■□□□□ 0.06
COPS3-201ENST00000268717 CLEC14AQ86T13 490 aa15.41■□□□□ 0.06
COPS3-201ENST00000268717 NPAS3Q8IXF0 933 aa15.41■□□□□ 0.06
COPS3-201ENST00000268717 CACNA2D3Q8IZS8 1091 aa15.41■□□□□ 0.06
COPS3-201ENST00000268717 BLOC1S5Q8TDH9 187 aa15.41■□□□□ 0.06
COPS3-201ENST00000268717 ZNF75CPQ92670 426 aaPredicted RBP15.41■□□□□ 0.06
COPS3-201ENST00000268717 NXPE3Q969Y0 559 aa15.41■□□□□ 0.06
COPS3-201ENST00000268717 RMDN1Q96DB5 314 aa15.41■□□□□ 0.06
COPS3-201ENST00000268717 SEC16BQ96JE7 1060 aa15.41■□□□□ 0.06
COPS3-201ENST00000268717 ZSWIM3Q96MP5 696 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms