RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 GAD1Q99259 594 aa16.98■□□□□ 0.31
RTN1-201ENST00000267484 GSTO2Q9H4Y5 243 aa16.98■□□□□ 0.31
RTN1-201ENST00000267484 TMEM181Q9P2C4 612 aa16.98■□□□□ 0.31
RTN1-201ENST00000267484 CNOT11Q9UKZ1 510 aaKnown RBP16.98■□□□□ 0.31
RTN1-201ENST00000267484 A0A087X1B8 175 aa16.97■□□□□ 0.31
RTN1-201ENST00000267484 CDKN2DP55273 166 aa16.97■□□□□ 0.31
RTN1-201ENST00000267484 ITKQ08881 620 aa16.97■□□□□ 0.31
RTN1-201ENST00000267484 DCTN2Q13561 401 aaKnown RBP16.97■□□□□ 0.31
RTN1-201ENST00000267484 GEN1Q17RS7 908 aa16.97■□□□□ 0.31
RTN1-201ENST00000267484 MAP7D1Q3KQU3 841 aa16.97■□□□□ 0.31
RTN1-201ENST00000267484 NHSL2Q5HYW2 709 aa16.97■□□□□ 0.31
RTN1-201ENST00000267484 CLVS1Q8IUQ0 354 aaPredicted RBP16.97■□□□□ 0.31
RTN1-201ENST00000267484 KCNA7Q96RP8 456 aa16.97■□□□□ 0.31
RTN1-201ENST00000267484 RANBP9Q96S59 729 aa16.97■□□□□ 0.31
RTN1-201ENST00000267484 SOX17Q9H6I2 414 aaPredicted RBP16.97■□□□□ 0.31
RTN1-201ENST00000267484 KCTD3Q9Y597 815 aa16.97■□□□□ 0.31
RTN1-201ENST00000267484 MT-ND1P03886 318 aa16.97■□□□□ 0.31
RTN1-201ENST00000267484 ADRA1AP35348 466 aa16.97■□□□□ 0.31
RTN1-201ENST00000267484 FOXA1P55317 472 aa16.97■□□□□ 0.31
RTN1-201ENST00000267484 DNAJB13P59910 316 aa16.97■□□□□ 0.31
RTN1-201ENST00000267484 CREB5Q02930 508 aa16.97■□□□□ 0.31
RTN1-201ENST00000267484 XKR4Q5GH76 650 aa16.97■□□□□ 0.31
RTN1-201ENST00000267484 FAM43BQ6ZT52 329 aaPredicted RBP16.97■□□□□ 0.31
RTN1-201ENST00000267484 OR6P1Q8NGX9 317 aa16.97■□□□□ 0.31
RTN1-201ENST00000267484 PNPLA3Q9NST1 481 aa16.97■□□□□ 0.31
RTN1-201ENST00000267484 SMOXQ9NWM0 555 aa16.97■□□□□ 0.31
RTN1-201ENST00000267484 MIOSQ9NXC5 875 aa16.97■□□□□ 0.31
RTN1-201ENST00000267484 TDRKHQ9Y2W6 561 aaKnown RBP16.97■□□□□ 0.31
RTN1-201ENST00000267484 NME4O00746 187 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 ANXA9O76027 345 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 LTA4HP09960 611 aaKnown RBP16.96■□□□□ 0.31
RTN1-201ENST00000267484 ALDH3B2P48448 385 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 APLP1P51693 650 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 POU4F1Q01851 419 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 LPIN1Q14693 890 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 PTPRCAPQ14761 206 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 RAB41Q5JT25 222 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 DUS1LQ6P1R4 473 aaKnown RBP16.96■□□□□ 0.31
RTN1-201ENST00000267484 BORAQ6PGQ7 559 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 IFNEQ86WN2 208 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 MYLPFQ96A32 169 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 PBXIP1Q96AQ6 731 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 PGAP3Q96FM1 320 aaPredicted RBP16.96■□□□□ 0.31
RTN1-201ENST00000267484 KLHL5Q96PQ7 755 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 MUC3BQ9H195 1237 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 CDC14AQ9UNH5 594 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 PDCD11Q14690 1871 aaKnown RBP16.96■□□□□ 0.31
RTN1-201ENST00000267484 RBM47A0AV96 593 aaKnown RBP16.96■□□□□ 0.31
RTN1-201ENST00000267484 CACNG3O60359 315 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 OXTRP30559 389 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 ARSDP51689 593 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 WNT3AP56704 352 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 PPIL2Q13356 520 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 TBCELQ5QJ74 424 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 HECTD2Q5U5R9 776 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 AGAP9Q5VTM2 703 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 POTEHQ6S545 545 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 TMEM209Q96SK2 561 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 SLC25A23Q9BV35 468 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 AKTIPQ9H8T0 292 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 MARCH4Q9P2E8 410 aaPredicted RBP16.96■□□□□ 0.31
RTN1-201ENST00000267484 PAGE1O75459 146 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 F9P00740 461 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 CES1P23141 567 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 CCNCP24863 283 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 PSMD8P48556 350 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 CDK9P50750 372 aaKnown RBP16.96■□□□□ 0.31
RTN1-201ENST00000267484 GRB7Q14451 532 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 MAPRE2Q15555 327 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 SAMD4BQ5PRF9 694 aaKnown RBP16.96■□□□□ 0.31
RTN1-201ENST00000267484 KLHL35Q6PF15 583 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 EPHX4Q8IUS5 362 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 OFCC1Q8IZS5 231 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 EML4Q9HC35 981 aaKnown RBP16.96■□□□□ 0.31
RTN1-201ENST00000267484 TIMMDC1Q9NPL8 285 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 MAP10Q9P2G4 905 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 SARDHQ9UL12 918 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 V9GYQ6 96 aa16.96■□□□□ 0.31
RTN1-201ENST00000267484 ENTPD1P49961 510 aa16.95■□□□□ 0.3
RTN1-201ENST00000267484 RANBP10Q6VN20 620 aa16.95■□□□□ 0.3
RTN1-201ENST00000267484 LARP4Q71RC2 724 aaKnown RBP eCLIP16.95■□□□□ 0.3
RTN1-201ENST00000267484 FASTKD5Q7L8L6 764 aaKnown RBP16.95■□□□□ 0.3
RTN1-201ENST00000267484 C14orf80Q86SX3 495 aa16.95■□□□□ 0.3
RTN1-201ENST00000267484 SHCBP1Q8NEM2 672 aa16.95■□□□□ 0.3
RTN1-201ENST00000267484 FBXL20Q96IG2 436 aa16.95■□□□□ 0.3
RTN1-201ENST00000267484 NSUN5Q96P11 429 aaKnown RBP16.95■□□□□ 0.3
RTN1-201ENST00000267484 TSGA13Q96PP4 275 aa16.95■□□□□ 0.3
RTN1-201ENST00000267484 PPP1R10Q96QC0 940 aaKnown RBP16.95■□□□□ 0.3
RTN1-201ENST00000267484 IL12RB2Q99665 862 aa16.95■□□□□ 0.3
RTN1-201ENST00000267484 TMLHEQ9NVH6 421 aa16.95■□□□□ 0.3
RTN1-201ENST00000267484 PADI4Q9UM07 663 aa16.95■□□□□ 0.3
RTN1-201ENST00000267484 BRCA1P38398 1863 aaKnown RBP16.95■□□□□ 0.3
RTN1-201ENST00000267484 A0A0J9YYE9 177 aa16.95■□□□□ 0.3
RTN1-201ENST00000267484 RRN3P2A6NIE6 340 aa16.95■□□□□ 0.3
RTN1-201ENST00000267484 BTBD19C9JJ37 291 aa16.95■□□□□ 0.3
RTN1-201ENST00000267484 DLGAP1O14490 977 aa16.95■□□□□ 0.3
RTN1-201ENST00000267484 GJB3O75712 270 aa16.95■□□□□ 0.3
RTN1-201ENST00000267484 SH3BP2P78314 561 aa16.95■□□□□ 0.3
RTN1-201ENST00000267484 TFAP2DQ7Z6R9 452 aa16.95■□□□□ 0.3
RTN1-201ENST00000267484 OR2T34Q8NGX1 318 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms