RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 RNF112Q9ULX5 631 aa11.59□□□□□ -0.55
CLSTN3-201ENST00000266546 GON4LQ3T8J9 2241 aa11.59□□□□□ -0.55
CLSTN3-201ENST00000266546 FAM155AB1AL88 458 aaPredicted RBP11.59□□□□□ -0.55
CLSTN3-201ENST00000266546 ZBTB11O95625 1053 aaPredicted RBP11.59□□□□□ -0.55
CLSTN3-201ENST00000266546 EDN1P05305 212 aa11.59□□□□□ -0.55
CLSTN3-201ENST00000266546 IQCF3P0C7M6 154 aa11.59□□□□□ -0.55
CLSTN3-201ENST00000266546 RUNX1T1Q06455 604 aa11.59□□□□□ -0.55
CLSTN3-201ENST00000266546 POLD3Q15054 466 aaPredicted RBP11.59□□□□□ -0.55
CLSTN3-201ENST00000266546 INAQ16352 499 aa11.59□□□□□ -0.55
CLSTN3-201ENST00000266546 PLEKHG4Q58EX7 1191 aa11.59□□□□□ -0.55
CLSTN3-201ENST00000266546 SLC26A9Q7LBE3 791 aa11.59□□□□□ -0.55
CLSTN3-201ENST00000266546 ADGRG6Q86SQ4 1221 aa11.59□□□□□ -0.55
CLSTN3-201ENST00000266546 HORMAD1Q86X24 394 aa11.59□□□□□ -0.55
CLSTN3-201ENST00000266546 OR7A2PQ8NGA2 310 aa11.59□□□□□ -0.55
CLSTN3-201ENST00000266546 LRTOMTQ8WZ04 291 aa11.59□□□□□ -0.55
CLSTN3-201ENST00000266546 HERPUD2Q9BSE4 406 aa11.59□□□□□ -0.55
CLSTN3-201ENST00000266546 NDFIP2Q9NV92 336 aa11.59□□□□□ -0.55
CLSTN3-201ENST00000266546 TMEM161AQ9NX61 479 aa11.59□□□□□ -0.55
CLSTN3-201ENST00000266546 COQ6Q9Y2Z9 468 aa11.59□□□□□ -0.55
CLSTN3-201ENST00000266546 TEX264Q9Y6I9 313 aa11.59□□□□□ -0.55
CLSTN3-201ENST00000266546 KIAA1217Q5T5P2 1943 aa11.59□□□□□ -0.55
CLSTN3-201ENST00000266546 SF3B1O75533 1304 aaKnown RBP eCLIP11.58□□□□□ -0.562e-6■■■■■ 160.8
CLSTN3-201ENST00000266546 OR6C75A6NL08 312 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 TBKBP1A7MCY6 615 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 NRP2O60462 931 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 PENKP01210 267 aaPredicted RBP11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 XRCC1P18887 633 aaPredicted RBP11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 CYP2C18P33260 490 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 AIF1P55008 147 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 TRIM25Q14258 630 aaKnown RBP11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 SOWAHAQ2M3V2 549 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 STRADAQ7RTN6 431 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 NRG4Q8WWG1 115 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 NENFQ9UMX5 172 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 MYADML2A6NDP7 307 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 KCNU1A8MYU2 1149 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 MFN2O95140 757 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 LTFP02788 710 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 DNAJB2P25686 324 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 ADSLP30566 484 aaPredicted RBP11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 C11orf91Q3C1V1 193 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 TTC23Q5W5X9 447 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 FAM35AQ86V20 835 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 NETO2Q8NC67 525 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 SNX19Q92543 992 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 P2RY11Q96G91 374 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 BBS2Q9BXC9 721 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 GOLGA2P5Q9HBQ8 144 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 UTP6Q9NYH9 597 aaKnown RBP11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 ASB3Q9Y575 518 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 NCF1BA6NI72 391 aaPredicted RBP11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 NCF1CA8MVU1 366 aaPredicted RBP11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 RGS5O15539 181 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 PAPSS1O43252 624 aaPredicted RBP11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 AMHP03971 560 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 NCF1P14598 390 aaPredicted RBP11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 WNT7BP56706 349 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 MGAT5BQ3V5L5 792 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 PGBD3Q8N328 593 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 SPATA6LQ8N4H0 392 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 CBR4Q8N4T8 237 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 DNAJB14Q8TBM8 379 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 WNT8BQ93098 351 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 CDK5RAP1Q96SZ6 601 aaKnown RBP11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 PCDHB8Q9UN66 801 aa11.58□□□□□ -0.56
CLSTN3-201ENST00000266546 A0A1W2PQ45 241 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 A0A1W2PQY0 241 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 ZNF12P17014 697 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 IL1R2P27930 398 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 MATKP42679 507 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 PTPN9P43378 593 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 CDK18Q07002 472 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 DGCR6Q14129 220 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 CENPLQ8N0S6 344 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 FIG4Q92562 907 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 ZFYVE19Q96K21 471 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 VAT1Q99536 393 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 RNF39Q9H2S5 420 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 ATXN3LQ9H3M9 355 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 HIPK3Q9H422 1215 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 SIRPGQ9P1W8 387 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 CCDC154A6NI56 674 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 HS6ST1O60243 411 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 ADAMTS4O75173 837 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 VEGFBP49765 207 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 KPNA1P52294 538 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 MRPS5P82675 430 aaKnown RBP11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 BNIP2Q12982 314 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 SPIDRQ14159 915 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 CCDC85BQ15834 202 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 FAM182AQ5T1J6 154 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 NEPROQ6NW34 567 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 PHTF2Q8N3S3 785 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 KLHDC9Q8NEP7 349 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 ITFG1Q8TB96 612 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 BLOC1S5Q8TDH9 187 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 ZNF296Q8WUU4 475 aaPredicted RBP11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 ULBP1Q9BZM6 244 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 UNC93B1Q9H1C4 597 aa11.57□□□□□ -0.56
CLSTN3-201ENST00000266546 OLA1Q9NTK5 396 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms