RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 FBXW8Q8N3Y1 598 aa16.79■□□□□ 0.28
PHRF1-201ENST00000264555 ELMO1Q92556 727 aa16.79■□□□□ 0.28
PHRF1-201ENST00000264555 HIPK3Q9H422 1215 aa16.79■□□□□ 0.28
PHRF1-201ENST00000264555 TBC1D30Q9Y2I9 924 aa16.79■□□□□ 0.28
PHRF1-201ENST00000264555 ATP6AP2A0A1C7CYW4 349 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 ATP6AP2O75787 350 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 RGS20O76081 388 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 CTPS1P17812 591 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 ARL4DP49703 201 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 GRB14Q14449 540 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 VARS2Q5ST30 1063 aaKnown RBP16.78■□□□□ 0.28
PHRF1-201ENST00000264555 SYPL2Q5VXT5 272 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 STX19Q8N4C7 294 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 B4GALNT2Q8NHY0 566 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 STYXQ8WUJ0 223 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 HAPLN3Q96S86 360 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 FAM192AQ9GZU8 254 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 PACSIN3Q9UKS6 424 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 ARIH1Q9Y4X5 557 aaPredicted RBP16.78■□□□□ 0.28
PHRF1-201ENST00000264555 ZNF839A8K0R7 811 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 NMBRP28336 390 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 DSC2Q02487 901 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 C1orf220Q5T0J3 134 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 FAM228AQ86W67 206 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 ZDHHC13Q8IUH4 622 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 REM2Q8IYK8 340 aaPredicted RBP16.78■□□□□ 0.28
PHRF1-201ENST00000264555 FUBP3Q96I24 572 aaKnown RBP eCLIP16.78■□□□□ 0.28
PHRF1-201ENST00000264555 TCRBV7S3A2A0A539 114 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 PPEF2O14830 753 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 ATP6V1C1P21283 382 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 FOXN2P32314 431 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 CDH13P55290 713 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 BNIP2Q12982 314 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 TRIP4Q15650 581 aaPredicted RBP16.78■□□□□ 0.28
PHRF1-201ENST00000264555 CCL14Q16627 93 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 NCBP2-AS2Q69YL0 99 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 AADATQ8N5Z0 425 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 MAGEC3Q8TD91 643 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 MTFMTQ96DP5 389 aaKnown RBP16.78■□□□□ 0.28
PHRF1-201ENST00000264555 RNF39Q9H2S5 420 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 SLC28A1O00337 649 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 QSOX1O00391 747 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 SIN3BO75182 1162 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 CORO1AP31146 461 aaKnown RBP16.78■□□□□ 0.28
PHRF1-201ENST00000264555 HPCAL1P37235 193 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 RXRGP48443 463 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 WDR4P57081 412 aaKnown RBP16.78■□□□□ 0.28
PHRF1-201ENST00000264555 TGM3Q08188 693 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 PRKG2Q13237 762 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 FUT10Q6P4F1 479 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 FIBCD1Q8N539 461 aa16.78■□□□□ 0.28
PHRF1-201ENST00000264555 RBM15BQ8NDT2 890 aaKnown RBP16.78■□□□□ 0.28
PHRF1-201ENST00000264555 KIAA1522Q9P206 1035 aaPredicted RBP16.78■□□□□ 0.28
PHRF1-201ENST00000264555 MT-CYBP00156 380 aaPredicted RBP16.77■□□□□ 0.28
PHRF1-201ENST00000264555 HCAR3P49019 387 aa16.77■□□□□ 0.28
PHRF1-201ENST00000264555 GPR15P49685 360 aa16.77■□□□□ 0.28
PHRF1-201ENST00000264555 MPP1Q00013 466 aa16.77■□□□□ 0.28
PHRF1-201ENST00000264555 PAGE2BQ5JRK9 111 aa16.77■□□□□ 0.28
PHRF1-201ENST00000264555 OR4K2Q8NGD2 314 aa16.77■□□□□ 0.28
PHRF1-201ENST00000264555 MAGEH1Q9H213 219 aa16.77■□□□□ 0.28
PHRF1-201ENST00000264555 GTF2IRD1Q9UHL9 959 aa16.77■□□□□ 0.28
PHRF1-201ENST00000264555 MOXD2PA6NHM9 499 aa16.77■□□□□ 0.28
PHRF1-201ENST00000264555 ACSL4O60488 711 aa16.77■□□□□ 0.28
PHRF1-201ENST00000264555 TM7SF2O76062 418 aa16.77■□□□□ 0.28
PHRF1-201ENST00000264555 PPIDQ08752 370 aaKnown RBP16.77■□□□□ 0.28
PHRF1-201ENST00000264555 PPP1R16AQ96I34 528 aa16.77■□□□□ 0.28
PHRF1-201ENST00000264555 STRA6Q9BX79 667 aa16.77■□□□□ 0.28
PHRF1-201ENST00000264555 TMEM216Q9P0N5 145 aa16.77■□□□□ 0.28
PHRF1-201ENST00000264555 TULP2O00295 520 aa16.77■□□□□ 0.28
PHRF1-201ENST00000264555 LINC00032P0C843 101 aa16.77■□□□□ 0.28
PHRF1-201ENST00000264555 RABGGTBP53611 331 aa16.77■□□□□ 0.28
PHRF1-201ENST00000264555 SGCGQ13326 291 aa16.77■□□□□ 0.28
PHRF1-201ENST00000264555 KCNJ11Q14654 390 aa16.77■□□□□ 0.28
PHRF1-201ENST00000264555 ZNF621Q6ZSS3 439 aa16.77■□□□□ 0.28
PHRF1-201ENST00000264555 HMCESQ96FZ2 354 aa16.77■□□□□ 0.28
PHRF1-201ENST00000264555 MAGEB10Q96LZ2 347 aaPredicted RBP16.77■□□□□ 0.28
PHRF1-201ENST00000264555 PAPOLBQ9NRJ5 636 aaKnown RBP16.77■□□□□ 0.28
PHRF1-201ENST00000264555 ADPRHL2Q9NX46 363 aa16.77■□□□□ 0.28
PHRF1-201ENST00000264555 ZNF711Q9Y462 761 aa16.77■□□□□ 0.28
PHRF1-201ENST00000264555 C1RP00736 705 aa16.77■□□□□ 0.27
PHRF1-201ENST00000264555 ABCB1P08183 1280 aaPredicted RBP16.77■□□□□ 0.27
PHRF1-201ENST00000264555 CDH4P55283 916 aa16.77■□□□□ 0.27
PHRF1-201ENST00000264555 IL5RAQ01344 420 aa16.77■□□□□ 0.27
PHRF1-201ENST00000264555 PFKPQ01813 784 aa16.77■□□□□ 0.27
PHRF1-201ENST00000264555 EFCAB3Q8N7B9 438 aa16.77■□□□□ 0.27
PHRF1-201ENST00000264555 GSTCDQ8NEC7 633 aa16.77■□□□□ 0.27
PHRF1-201ENST00000264555 DCAKDQ8WVC6 231 aa16.77■□□□□ 0.27
PHRF1-201ENST00000264555 MYO19Q96H55 970 aa16.77■□□□□ 0.27
PHRF1-201ENST00000264555 NAV1Q8NEY1 1877 aa16.77■□□□□ 0.27
PHRF1-201ENST00000264555 H0YGN5 161 aa16.77■□□□□ 0.27
PHRF1-201ENST00000264555 CDC25CP30307 473 aa16.77■□□□□ 0.27
PHRF1-201ENST00000264555 ZNF132P52740 706 aa16.77■□□□□ 0.27
PHRF1-201ENST00000264555 TSTD2Q5T7W7 516 aa16.77■□□□□ 0.27
PHRF1-201ENST00000264555 ESRP1Q6NXG1 681 aaKnown RBP16.77■□□□□ 0.27
PHRF1-201ENST00000264555 TMCO5AQ8N6Q1 288 aa16.77■□□□□ 0.27
PHRF1-201ENST00000264555 DNAJB14Q8TBM8 379 aa16.77■□□□□ 0.27
PHRF1-201ENST00000264555 SPPL2AQ8TCT8 520 aa16.77■□□□□ 0.27
PHRF1-201ENST00000264555 NFS1Q9Y697 457 aa16.77■□□□□ 0.27
PHRF1-201ENST00000264555 PARNO95453 639 aaKnown RBP16.76■□□□□ 0.27
PHRF1-201ENST00000264555 PKMP14618 531 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms