RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 KCTD3Q9Y597 815 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 UBA6A0AVT1 1052 aaPredicted RBP12.44□□□□□ -0.42
CHMP3-201ENST00000263856 NPHS1O60500 1241 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 GPR32O75388 356 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 SLC7A1P30825 629 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 CD86P42081 329 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 SLC5A3P53794 718 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 CYP51A1Q16850 503 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 PFKFB4Q16877 469 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 TECRLQ5HYJ1 363 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 ANKRD23Q86SG2 305 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 C19orf60Q96EN9 201 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 ZNF597Q96LX8 424 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 NSUN5Q96P11 429 aaKnown RBP12.44□□□□□ -0.42
CHMP3-201ENST00000263856 VAT1Q99536 393 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 TSPYL2Q9H2G4 693 aaPredicted RBP12.44□□□□□ -0.42
CHMP3-201ENST00000263856 SMOXQ9NWM0 555 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 GDAP2Q9NXN4 497 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 VPS28Q9UK41 221 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 OAZ3Q9UMX2 235 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 DHRS12A0PJE2 317 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 H3BMM5 538 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 UBFD1O14562 309 aaKnown RBP12.44□□□□□ -0.42
CHMP3-201ENST00000263856 KCNC1P48547 511 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 APLP1P51693 650 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 WNT3AP56704 352 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 BEX3Q00994 111 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 C6orf10Q5SRN2 563 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 HECTD2Q5U5R9 776 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 RETREG3Q86VR2 466 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 ANKRD13AQ8IZ07 590 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 LRRC43Q8N309 656 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 PCYOX1LQ8NBM8 494 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 OR2T34Q8NGX1 318 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 OR2T3Q8NH03 318 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 DQX1Q8TE96 717 aaKnown RBP12.44□□□□□ -0.42
CHMP3-201ENST00000263856 TRPC4APQ8TEL6 797 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 VPS33AQ96AX1 596 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 AKTIPQ9H8T0 292 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 TIMMDC1Q9NPL8 285 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 MRPL40Q9NQ50 206 aaKnown RBP12.44□□□□□ -0.42
CHMP3-201ENST00000263856 IGSF5Q9NSI5 407 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 CPA4Q9UI42 421 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 CLEC11AQ9Y240 323 aa12.44□□□□□ -0.42
CHMP3-201ENST00000263856 A0A087X1B8 175 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 BOLA2-SMG1P6H3BVE0 249 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 MYL3P08590 195 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 ALDOCP09972 364 aaKnown RBP12.43□□□□□ -0.42
CHMP3-201ENST00000263856 IL10P22301 178 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 OXTRP30559 389 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 ADSLP30566 484 aaPredicted RBP12.43□□□□□ -0.42
CHMP3-201ENST00000263856 CCR1P32246 355 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 GEMP55040 296 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 FOXA1P55317 472 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 SEMA3BQ13214 749 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 GRB7Q14451 532 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 RFTN1Q14699 578 aaPredicted RBP12.43□□□□□ -0.42
CHMP3-201ENST00000263856 MAMDC4Q6UXC1 1216 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 SCN4BQ8IWT1 228 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 PTGR2Q8N8N7 351 aaPredicted RBP12.43□□□□□ -0.42
CHMP3-201ENST00000263856 BLOC1S5Q8TDH9 187 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 HDAC10Q969S8 669 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 MYLPFQ96A32 169 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 NTAN1Q96AB6 310 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 C12orf43Q96C57 262 aaKnown RBP12.43□□□□□ -0.42
CHMP3-201ENST00000263856 TCF12Q99081 682 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 SLC2A11Q9BYW1 496 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 SEMA4BQ9NPR2 832 aaPredicted RBP12.43□□□□□ -0.42
CHMP3-201ENST00000263856 TIMM22Q9Y584 194 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 UBXN8O00124 270 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 PIP5K1BO14986 540 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 CLOCKO15516 846 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 COL6A2P12110 1019 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 PSMA4P25789 261 aaKnown RBP12.43□□□□□ -0.42
CHMP3-201ENST00000263856 ARCN1P48444 511 aaKnown RBP12.43□□□□□ -0.42
CHMP3-201ENST00000263856 CCR3P51677 355 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 SDHAF4Q5VUM1 108 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 DUS1LQ6P1R4 473 aaKnown RBP12.43□□□□□ -0.42
CHMP3-201ENST00000263856 XKR5Q6UX68 686 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 ALKAL1Q6UXT8 129 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 FASTKD5Q7L8L6 764 aaKnown RBP12.43□□□□□ -0.42
CHMP3-201ENST00000263856 TRIM74Q86UV6 250 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 TRIM73Q86UV7 250 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 CARM1Q86X55 608 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 PELI3Q8N2H9 469 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 PDZD8Q8NEN9 1154 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 RIN3Q8TB24 985 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 ESAMQ96AP7 390 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 POLR1BQ9H9Y6 1135 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 CNGB3Q9NQW8 809 aa12.43□□□□□ -0.42
CHMP3-201ENST00000263856 NME4O00746 187 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 EI24O14681 340 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 SLC22A2O15244 555 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 PAGE1O75459 146 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 SNAI1O95863 264 aaPredicted RBP12.42□□□□□ -0.42
CHMP3-201ENST00000263856 C8BP07358 591 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 NR4A1P22736 598 aa12.42□□□□□ -0.42
CHMP3-201ENST00000263856 WARSP23381 471 aaKnown RBP12.42□□□□□ -0.42
CHMP3-201ENST00000263856 CDK9P50750 372 aaKnown RBP12.42□□□□□ -0.42
CHMP3-201ENST00000263856 HK2P52789 917 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms